RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 TAS1R2Q8TE23 839 aa15.9■□□□□ 0.14
HDAC5-206ENST00000587776 PRCCQ92733 491 aaPredicted RBP15.9■□□□□ 0.14
HDAC5-206ENST00000587776 SIPA1Q96FS4 1042 aa15.9■□□□□ 0.14
HDAC5-206ENST00000587776 HEXIM2Q96MH2 286 aaKnown RBP15.9■□□□□ 0.14
HDAC5-206ENST00000587776 CIPCQ9C0C6 399 aa15.9■□□□□ 0.14
HDAC5-206ENST00000587776 WSB2Q9NYS7 404 aaPredicted RBP15.9■□□□□ 0.14
HDAC5-206ENST00000587776 CLIC5Q9NZA1 410 aa15.9■□□□□ 0.14
HDAC5-206ENST00000587776 USP36Q9P275 1121 aaKnown RBP15.9■□□□□ 0.14
HDAC5-206ENST00000587776 THAP10Q9P2Z0 257 aaPredicted RBP15.9■□□□□ 0.14
HDAC5-206ENST00000587776 FBXO10Q9UK96 956 aa15.9■□□□□ 0.14
HDAC5-206ENST00000587776 APOBEC2Q9Y235 224 aaKnown RBP15.9■□□□□ 0.14
HDAC5-206ENST00000587776 ADAMTS20P59510 1910 aa15.9■□□□□ 0.14
HDAC5-206ENST00000587776 PLXNB3Q9ULL4 1909 aa15.9■□□□□ 0.14
HDAC5-206ENST00000587776 A0A1B0GVL5 298 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 MAPK13O15264 365 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 GJB3O75712 270 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 KLKB1P03952 638 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 MYL1P05976 194 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 PFKFB1P16118 471 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 OXTRP30559 389 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 SLC8A3P57103 927 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 DNM1Q05193 864 aaKnown RBP15.89■□□□□ 0.13
HDAC5-206ENST00000587776 ZNF234Q14588 700 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 FYB2Q5VWT5 728 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 METTL3Q86U44 580 aaKnown RBP15.89■□□□□ 0.13
HDAC5-206ENST00000587776 TMPRSS6Q8IU80 811 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 ARHGAP18Q8N392 663 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 SETD7Q8WTS6 366 aaKnown RBP15.89■□□□□ 0.13
HDAC5-206ENST00000587776 DDI1Q8WTU0 396 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 SNX19Q92543 992 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 MKRN2Q9H000 416 aaKnown RBP15.89■□□□□ 0.13
HDAC5-206ENST00000587776 ITM2CQ9NQX7 267 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 MARCH2Q9P0N8 246 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 USP25Q9UHP3 1055 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 TRAF3IP3Q9Y228 551 aa15.89■□□□□ 0.13
HDAC5-206ENST00000587776 ASPMQ8IZT6 3477 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 SLC12A8A0AV02 714 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 CER1O95813 267 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 EPHX1P07099 455 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 TPMTP51580 245 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 PPP3CAQ08209 521 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 EIF4HQ15056 248 aaKnown RBP15.88■□□□□ 0.13
HDAC5-206ENST00000587776 LRSAM1Q6UWE0 723 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 SERPINA13PQ6UXR4 307 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 FAM124AQ86V42 546 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 ZNF276Q8N554 614 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 PNPLA1Q8N8W4 532 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 CADM4Q8NFZ8 388 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 GAREM1Q9H706 876 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 TMEM8AQ9HCN3 771 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 AGO1Q9UL18 857 aaKnown RBP15.88■□□□□ 0.13
HDAC5-206ENST00000587776 MAPK8IP1Q9UQF2 711 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 NFE2L3Q9Y4A8 694 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 USP3Q9Y6I4 520 aa15.88■□□□□ 0.13
HDAC5-206ENST00000587776 FAM221BA6H8Z2 402 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 KCNJ18B7U540 433 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 BCAT2O15382 392 aaPredicted RBP15.87■□□□□ 0.13
HDAC5-206ENST00000587776 HOXB3P14651 431 aaPredicted RBP15.87■□□□□ 0.13
HDAC5-206ENST00000587776 RPL13P26373 211 aaKnown RBP15.87■□□□□ 0.13
HDAC5-206ENST00000587776 PSMC2P35998 433 aaKnown RBP15.87■□□□□ 0.13
HDAC5-206ENST00000587776 MATKP42679 507 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 YWHAGP61981 247 aaKnown RBP eCLIP15.87■□□□□ 0.13
HDAC5-206ENST00000587776 PROSER1Q86XN7 944 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 TTC39CQ8N584 583 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 ADAMTS14Q8WXS8 1223 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 SORCS1Q8WY21 1168 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 DNASE2BQ8WZ79 361 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 PLD4Q96BZ4 506 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 P2RY11Q96G91 374 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 PIWIL1Q96J94 861 aaKnown RBP15.87■□□□□ 0.13
HDAC5-206ENST00000587776 NUP58Q9BVL2 599 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 ELOVL2Q9NXB9 296 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 EIF2B4Q9UI10 523 aaKnown RBP15.87■□□□□ 0.13
HDAC5-206ENST00000587776 RCOR1Q9UKL0 485 aa15.87■□□□□ 0.13
HDAC5-206ENST00000587776 NUMA1Q14980 2115 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 PKD1L2Q7Z442 2459 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 MUC22E2RYF6 1773 aaPredicted RBP15.86■□□□□ 0.13
HDAC5-206ENST00000587776 PRKCHP24723 683 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 SCAPQ12770 1279 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 ENPP2Q13822 863 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 NFIL3Q16649 462 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 FNDC3BQ53EP0 1204 aaKnown RBP15.86■□□□□ 0.13
HDAC5-206ENST00000587776 KRT39Q6A163 491 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 IL27RAQ6UWB1 636 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 CPXM2Q8N436 756 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 SNX21Q969T3 373 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 TMEM176AQ96HP8 235 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 SLC2A11Q9BYW1 496 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 TM7SF3Q9NS93 570 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 CISHQ9NSE2 258 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 SPEGQ15772 3267 aa15.86■□□□□ 0.13
HDAC5-206ENST00000587776 WDFY3Q8IZQ1 3526 aa15.85■□□□□ 0.13
HDAC5-206ENST00000587776 ZZEF1O43149 2961 aa15.85■□□□□ 0.13
HDAC5-206ENST00000587776 METTL12A8MUP2 240 aa15.85■□□□□ 0.13
HDAC5-206ENST00000587776 RHOBTB3O94955 611 aa15.85■□□□□ 0.13
HDAC5-206ENST00000587776 PRR29P0C7W0 189 aa15.85■□□□□ 0.13
HDAC5-206ENST00000587776 CMA1P23946 247 aa15.85■□□□□ 0.13
HDAC5-206ENST00000587776 SYKP43405 635 aa15.85■□□□□ 0.13
HDAC5-206ENST00000587776 HARS2P49590 506 aaKnown RBP15.85■□□□□ 0.13
HDAC5-206ENST00000587776 MXI1P50539 228 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms