RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 H7C0C1 242 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 CREB3O43889 395 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 BAIAP3O94812 1187 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 ATP5OP48047 213 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 CXCR3P49682 368 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 SLMAPQ14BN4 828 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 UAP1Q16222 522 aaPredicted RBP20.58■□□□□ 0.88
TRIM47-204ENST00000587339 PSMD5Q16401 504 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 SLC8B1Q6J4K2 584 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 RHBDF2Q6PJF5 856 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 DENND5BQ6ZUT9 1274 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 MON1AQ86VX9 555 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 UNC45BQ8IWX7 931 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 FAM71DQ8N9W8 422 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 PIK3R5Q8WYR1 880 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 RNF34Q969K3 372 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 VN1R3Q9BXE9 311 aa20.58■□□□□ 0.88
TRIM47-204ENST00000587339 SOAT2O75908 522 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 AMPD1P23109 780 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 NR2C2P49116 596 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 PGFP49763 221 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 PMS2P54278 862 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 DUSP4Q13115 394 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 OTOP2Q7RTS6 562 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 GPR152Q8TDT2 470 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 TMEM169Q96HH4 297 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 TKTL2Q9H0I9 626 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 TSPYL1Q9H0U9 437 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 CRISPLD1Q9H336 500 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 PRDM16Q9HAZ2 1276 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 NMUR1Q9HB89 426 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 ANLNQ9NQW6 1124 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 A0A1W2PQH9 124 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 DNALI1O14645 258 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-204ENST00000587339 MAP3K6O95382 1288 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 SYF2O95926 243 aaKnown RBP20.57■□□□□ 0.88
TRIM47-204ENST00000587339 IGLV3-25P01717 112 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 HAPLN1P10915 354 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-204ENST00000587339 USP46P62068 366 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 SPDYCQ5MJ68 293 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 CCDC25Q86WR0 208 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 CMTR2Q8IYT2 770 aaKnown RBP20.57■□□□□ 0.88
TRIM47-204ENST00000587339 GOLGA6L1Q8N7Z2 621 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 ARHGEF4Q9NR80 690 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 PLAAQ9Y263 795 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 BACE2Q9Y5Z0 518 aa20.57■□□□□ 0.88
TRIM47-204ENST00000587339 I6L893 689 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-204ENST00000587339 EEF2KO00418 725 aaKnown RBP20.56■□□□□ 0.88
TRIM47-204ENST00000587339 C2CD2LO14523 706 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 VNN2O95498 520 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 SOD2P04179 222 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 GBE1Q04446 702 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 NCBP2-AS2Q69YL0 99 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 HIBCHQ6NVY1 386 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-204ENST00000587339 B4GALNT4Q76KP1 1039 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 ARHGAP18Q8N392 663 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 SPATA17Q96L03 361 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 YME1L1Q96TA2 773 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 ADAM7Q9H2U9 754 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 SMOC2Q9H3U7 446 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 IL23AQ9NPF7 189 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 IL37Q9NZH6 218 aa20.56■□□□□ 0.88
TRIM47-204ENST00000587339 TPX2Q9ULW0 747 aaKnown RBP20.56■□□□□ 0.88
TRIM47-204ENST00000587339 WDR27A2RRH5 827 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 NDC80O14777 642 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 ADAM12O43184 909 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 IRAK2O43187 625 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 OPA1O60313 960 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 RTN3O95197 1032 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-204ENST00000587339 RARGP13631 454 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 RPL17P18621 184 aaKnown RBP20.55■□□□□ 0.88
TRIM47-204ENST00000587339 LAG3P18627 525 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 YWHAQP27348 245 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 OR1D2P34982 312 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 RPL10AP62906 217 aaKnown RBP20.55■□□□□ 0.88
TRIM47-204ENST00000587339 EIF4EBP2Q13542 120 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-204ENST00000587339 RFX8Q6ZV50 586 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 SLC39A11Q8N1S5 342 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 PABPC3Q9H361 631 aaKnown RBP20.55■□□□□ 0.88
TRIM47-204ENST00000587339 ETNK2Q9NVF9 386 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 SFMBT1Q9UHJ3 866 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 MRPL42Q9Y6G3 142 aaKnown RBP20.55■□□□□ 0.88
TRIM47-204ENST00000587339 FAM92AA1XBS5 289 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 FAM72CH0Y354 149 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 SLC10A2Q12908 348 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-204ENST00000587339 FAM72AQ5TYM5 149 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 FAM72DQ6L9T8 149 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 FAM72BQ86X60 149 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 CASP10Q92851 521 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 OSER1Q9NX31 292 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 DTLQ9NZJ0 730 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 PRKAG2Q9UGJ0 569 aa20.55■□□□□ 0.88
TRIM47-204ENST00000587339 BCLAF3A2AJT9 711 aaKnown RBP20.54■□□□□ 0.88
TRIM47-204ENST00000587339 CFAP69A5D8W1 941 aa20.54■□□□□ 0.88
TRIM47-204ENST00000587339 CARNS1A5YM72 827 aa20.54■□□□□ 0.88
TRIM47-204ENST00000587339 KCNN4O15554 427 aa20.54■□□□□ 0.88
TRIM47-204ENST00000587339 RPL22P35268 128 aaKnown RBP20.54■□□□□ 0.88
TRIM47-204ENST00000587339 CHKAP35790 457 aa20.54■□□□□ 0.88
TRIM47-204ENST00000587339 SEMA3BQ13214 749 aa20.54■□□□□ 0.88
TRIM47-204ENST00000587339 XRCC4Q13426 336 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 2778.6 ms