RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 ZC3H10Q96K80 434 aaKnown RBP18.47■□□□□ 0.55
TPM4-206ENST00000587201 TUBGCP2Q9BSJ2 902 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 DUSP15Q9H1R2 295 aaPredicted RBP18.47■□□□□ 0.55
TPM4-206ENST00000587201 NDST4Q9H3R1 872 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 HCN2Q9UL51 889 aa18.47■□□□□ 0.55
TPM4-206ENST00000587201 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.47■□□□□ 0.55
TPM4-206ENST00000587201 EML5Q05BV3 1969 aa18.46■□□□□ 0.55
TPM4-206ENST00000587201 BECN2A8MW95 431 aa18.46■□□□□ 0.55
TPM4-206ENST00000587201 PES1O00541 588 aaKnown RBP18.46■□□□□ 0.55
TPM4-206ENST00000587201 HOXB2P14652 356 aa18.46■□□□□ 0.55
TPM4-206ENST00000587201 RPL34P49207 117 aaKnown RBP18.46■□□□□ 0.55
TPM4-206ENST00000587201 CT47A1Q5JQC4 288 aaPredicted RBP18.46■□□□□ 0.55
TPM4-206ENST00000587201 C11orf74Q86VG3 221 aa18.46■□□□□ 0.55
TPM4-206ENST00000587201 FAM217AQ8IXS0 508 aa18.46■□□□□ 0.55
TPM4-206ENST00000587201 HMGB4Q8WW32 186 aa18.46■□□□□ 0.55
TPM4-206ENST00000587201 SHC3Q92529 594 aa18.46■□□□□ 0.55
TPM4-206ENST00000587201 FAM149B1Q96BN6 582 aa18.46■□□□□ 0.55
TPM4-206ENST00000587201 DNAJC12Q9UKB3 198 aa18.46■□□□□ 0.55
TPM4-206ENST00000587201 SPTBN4Q9H254 2564 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 WDR87Q6ZQQ6 2873 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 FRYLO94915 3013 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 KCNJ18B7U540 433 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 GOLGA6L22H0YM25 854 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 SART1O43290 800 aaKnown RBP18.45■□□□□ 0.54
TPM4-206ENST00000587201 TSPAN3O60637 253 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 LATS1O95835 1130 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 NCAM1P13591 858 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 KCNJ12Q14500 433 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 PUM1Q14671 1186 aaKnown RBP eCLIP18.45■□□□□ 0.542e-10■■□□□ 13.3
TPM4-206ENST00000587201 CCDC6Q16204 474 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 MPPE1Q53F39 396 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 MIIPQ5JXC2 388 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 PRR23CQ6ZRP0 262 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 GPT2Q8TD30 523 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 STK32AQ8WU08 396 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 ACOX2Q99424 681 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 SLC4A5Q9BY07 1137 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 SIX2Q9NPC8 291 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 SAMSN1Q9NSI8 373 aaKnown RBP18.45■□□□□ 0.54
TPM4-206ENST00000587201 CYTH4Q9UIA0 394 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 SLC27A6Q9Y2P4 619 aa18.45■□□□□ 0.54
TPM4-206ENST00000587201 E5RJQ4 531 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 ZBTB24O43167 697 aaPredicted RBP18.44■□□□□ 0.54
TPM4-206ENST00000587201 SDHBP21912 280 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 TBX4P57082 545 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 ZNF445P59923 1031 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 PTK2Q05397 1052 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 GEN1Q17RS7 908 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 NUGGCQ68CJ6 796 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 UNC45BQ8IWX7 931 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 OLIG1Q8TAK6 271 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 RLN3Q8WXF3 142 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 SPACA7Q96KW9 195 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 DLL3Q9NYJ7 618 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 STOML2Q9UJZ1 356 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 AJAP1Q9UKB5 411 aaPredicted RBP18.44■□□□□ 0.54
TPM4-206ENST00000587201 CDV3Q9UKY7 258 aaKnown RBP18.44■□□□□ 0.54
TPM4-206ENST00000587201 CLEC4EQ9ULY5 219 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 NAALADL1Q9UQQ1 740 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 PCDHGA5Q9Y5G8 931 aa18.44■□□□□ 0.54
TPM4-206ENST00000587201 CAPN9O14815 690 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 FOXD2O60548 495 aaPredicted RBP18.43■□□□□ 0.54
TPM4-206ENST00000587201 ADGRF1Q5T601 910 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 DGLUCYQ7Z3D6 616 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 ANKS1BQ7Z6G8 1248 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 TMEM110Q86TL2 294 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 DQX1Q8TE96 717 aaKnown RBP18.43■□□□□ 0.54
TPM4-206ENST00000587201 UCMAQ8WVF2 138 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 ERLEC1Q96DZ1 483 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 TMA16Q96EY4 203 aaKnown RBP18.43■□□□□ 0.54
TPM4-206ENST00000587201 PIWIL1Q96J94 861 aaKnown RBP18.43■□□□□ 0.54
TPM4-206ENST00000587201 SERPINB11Q96P15 392 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 SLC2A11Q9BYW1 496 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 CACNA2D2Q9NY47 1150 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 NFE2L3Q9Y4A8 694 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 SPAG17Q6Q759 2223 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 SDK1Q7Z5N4 2213 aa18.43■□□□□ 0.54
TPM4-206ENST00000587201 MYO18AQ92614 2054 aaKnown RBP18.43■□□□□ 0.54
TPM4-206ENST00000587201 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.42■□□□□ 0.54
TPM4-206ENST00000587201 A0A1W2PQF6 199 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 FOXN3O00409 490 aaPredicted RBP18.42■□□□□ 0.54
TPM4-206ENST00000587201 GFRA2O00451 464 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 PAPSS1O43252 624 aaPredicted RBP18.42■□□□□ 0.54
TPM4-206ENST00000587201 IGLV3-27P01718 113 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 FYNP06241 537 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 ZNF806P0C7X5 589 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 GABRG2P18507 467 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 BCKDHBP21953 392 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 EEF1GP26641 437 aaKnown RBP18.42■□□□□ 0.54
TPM4-206ENST00000587201 HOXD9P28356 352 aaPredicted RBP18.42■□□□□ 0.54
TPM4-206ENST00000587201 MPLP40238 635 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 P2RY2P41231 377 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 SLC11A2P49281 568 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 CREB5Q02930 508 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 RING1Q06587 406 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 PDCLQ13371 301 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 BYSLQ13895 437 aaKnown RBP18.42■□□□□ 0.54
TPM4-206ENST00000587201 AASDHQ4L235 1098 aaPredicted RBP18.42■□□□□ 0.54
TPM4-206ENST00000587201 TCP11X2Q5H9J9 407 aa18.42■□□□□ 0.54
TPM4-206ENST00000587201 PMS2CLQ68D20 193 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms