RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 CD248Q9HCU0 757 aa13.78□□□□□ -0.2
H3F3B-205ENST00000587171 VPS45Q9NRW7 570 aa13.78□□□□□ -0.2
H3F3B-205ENST00000587171 BCCIPQ9P287 314 aaKnown RBP eCLIP13.78□□□□□ -0.2
H3F3B-205ENST00000587171 HBS1LQ9Y450 684 aaKnown RBP13.78□□□□□ -0.2
H3F3B-205ENST00000587171 A0A1W2PQF6 199 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 BCLAF3A2AJT9 711 aaKnown RBP13.77□□□□□ -0.21
H3F3B-205ENST00000587171 GABRG2P18507 467 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 RPL34P49207 117 aaKnown RBP13.77□□□□□ -0.21
H3F3B-205ENST00000587171 LIMK1P53667 647 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 MFAP3P55082 362 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 CREB5Q02930 508 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 MEA1Q16626 185 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 MAP7D1Q3KQU3 841 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 AASDHQ4L235 1098 aaPredicted RBP13.77□□□□□ -0.21
H3F3B-205ENST00000587171 MSANTD2Q6P1R3 559 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 TRIM65Q6PJ69 517 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 CHPFQ8IZ52 775 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 ASCC3Q8N3C0 2202 aaKnown RBP13.77□□□□□ -0.21
H3F3B-205ENST00000587171 C12orf50Q8NA57 414 aaPredicted RBP13.77□□□□□ -0.21
H3F3B-205ENST00000587171 MLKLQ8NB16 471 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 RLN3Q8WXF3 142 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 SPACA7Q96KW9 195 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 CLSTN2Q9H4D0 955 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 SMOC1Q9H4F8 434 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 EPG5Q9HCE0 2579 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 RXFP3Q9NSD7 469 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 SFMBT1Q9UHJ3 866 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 STOML2Q9UJZ1 356 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 CEP295Q9C0D2 2601 aa13.77□□□□□ -0.21
H3F3B-205ENST00000587171 DCDC2BA2VCK2 349 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 GFRA2O00451 464 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 PIK3R2O00459 728 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 FBXO21O94952 628 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 LATS1O95835 1130 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 LTFP02788 710 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 CYBBP04839 570 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 WASP42768 502 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 GPD2P43304 727 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 HARS2P49590 506 aaKnown RBP13.76□□□□□ -0.21
H3F3B-205ENST00000587171 BYSLQ13895 437 aaKnown RBP13.76□□□□□ -0.21
H3F3B-205ENST00000587171 IPO4Q8TEX9 1081 aaKnown RBP13.76□□□□□ -0.21
H3F3B-205ENST00000587171 CLEC4CQ8WTT0 213 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 PIWIL1Q96J94 861 aaKnown RBP13.76□□□□□ -0.21
H3F3B-205ENST00000587171 CRACR2AQ9BSW2 395 aa13.76□□□□□ -0.21
H3F3B-205ENST00000587171 UBE2TQ9NPD8 197 aaPredicted RBP13.76□□□□□ -0.21
H3F3B-205ENST00000587171 GTPBP10A4D1E9 387 aaKnown RBP13.75□□□□□ -0.21
H3F3B-205ENST00000587171 MSI1O43347 362 aaKnown RBP13.75□□□□□ -0.21
H3F3B-205ENST00000587171 CAVIN2O95810 425 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 IGLV3-27P01718 113 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 KRT5P13647 590 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 ZNF445P59923 1031 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 GEN1Q17RS7 908 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 TCEAL6Q6IPX3 200 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 SDE2Q6IQ49 451 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 KIAA1211LQ6NV74 962 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 ENOSF1Q7L5Y1 443 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 ANKS1BQ7Z6G8 1248 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 PGBD3Q8N328 593 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 FRMD1Q8N878 549 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 DDI1Q8WTU0 396 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 TCEAL3Q969E4 200 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 FAM81BQ96LP2 452 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 SLC2A11Q9BYW1 496 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 CACNA2D2Q9NY47 1150 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 CALCOCO1Q9P1Z2 691 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 MBD1Q9UIS9 605 aaPredicted RBP13.75□□□□□ -0.21
H3F3B-205ENST00000587171 CLEC4EQ9ULY5 219 aa13.75□□□□□ -0.21
H3F3B-205ENST00000587171 MUC22E2RYF6 1773 aaPredicted RBP13.74□□□□□ -0.21
H3F3B-205ENST00000587171 WASH3PC4AMC7 463 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 NPC1O15118 1278 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 FYNP06241 537 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 NDUFV2P19404 249 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 SLC9A1P19634 815 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 HOXD9P28356 352 aaPredicted RBP13.74□□□□□ -0.21
H3F3B-205ENST00000587171 DHPSP49366 369 aaPredicted RBP13.74□□□□□ -0.21
H3F3B-205ENST00000587171 RING1Q06587 406 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 ENPP2Q13822 863 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 EIF4HQ15056 248 aaKnown RBP13.74□□□□□ -0.21
H3F3B-205ENST00000587171 EXOC3L4Q17RC7 722 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 MPPE1Q53F39 396 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 SPDYCQ5MJ68 293 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 ADGRF1Q5T601 910 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 GJB7Q6PEY0 223 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 GBP6Q6ZN66 633 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 LPCAT2Q7L5N7 544 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 CYP2U1Q7Z449 544 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 CREBRFQ8IUR6 639 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 STK32AQ8WU08 396 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 ZNF606Q8WXB4 792 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 GOLGA1Q92805 767 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 MIS12Q9H081 205 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 THAP10Q9P2Z0 257 aaPredicted RBP13.74□□□□□ -0.21
H3F3B-205ENST00000587171 APEX2Q9UBZ4 518 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 RAD54BQ9Y620 910 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 KNL1Q8NG31 2342 aa13.74□□□□□ -0.21
H3F3B-205ENST00000587171 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.73□□□□□ -0.21
H3F3B-205ENST00000587171 LNP1A1A4G5 178 aa13.73□□□□□ -0.21
H3F3B-205ENST00000587171 BECN2A8MW95 431 aa13.73□□□□□ -0.21
H3F3B-205ENST00000587171 TM4SF5O14894 197 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms