RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 XIRP2A4UGR9 3374 aa15.19■□□□□ 0.02
SCAMP4-209ENST00000585335 CHADO15335 359 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 GJB6O95452 261 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 LATS1O95835 1130 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 IGLV3-25P01717 112 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 PSMA2P25787 234 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 CORO1AP31146 461 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 GDI1P31150 447 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 CCR1P32246 355 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 RDXP35241 583 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 SLC11A2P49281 568 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 RPL7AP62424 266 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 ATP11AP98196 1134 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 PFKPQ01813 784 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 RAD9BQ6WBX8 426 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 HTR3DQ70Z44 454 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 STRADAQ7RTN6 431 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 KIAA1328Q86T90 577 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 RNF135Q8IUD6 432 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 SLC44A3Q8N4M1 653 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 ATP6V0D2Q8N8Y2 350 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 FNIP1Q8TF40 1166 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 IRF7Q92985 503 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 ATP2A3Q93084 1043 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 NT5C3BQ969T7 300 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 RSPRY1Q96DX4 576 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 PGAP3Q96FM1 320 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 TBCBQ99426 244 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 DDX50Q9BQ39 737 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 CNPY3Q9BT09 278 aa15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 TCF20Q9UGU0 1960 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-209ENST00000585335 TMEM191CA6NGB0 347 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 RNF8O76064 485 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 NFATC1O95644 943 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 IGLV3-27P01718 113 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 SRFP11831 508 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 NR1H3Q13133 447 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 PPP2R5DQ14738 602 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 CDO1Q16878 200 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 CCDC14Q49A88 953 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 BRMS1LQ5PSV4 323 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 UBALD2Q8IYN6 164 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 ZNF564Q8TBZ8 553 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 CSGALNACT1Q8TDX6 532 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 FAM172AQ8WUF8 416 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 OSCP1Q8WVF1 389 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 RFFLQ8WZ73 363 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 ARHGEF26Q96DR7 871 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 PACSIN1Q9BY11 444 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 PLA2G2FQ9BZM2 168 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 IP6K2Q9UHH9 426 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 ANAPC7Q9UJX3 599 aa15.17■□□□□ 0.02
SCAMP4-209ENST00000585335 MYO1FO00160 1098 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 CHKAP35790 457 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 PITX1P78337 314 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 ZXDBP98169 803 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 PIGHQ14442 188 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 ACAP1Q15027 740 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 C15orf59Q2T9L4 293 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 ARL13BQ3SXY8 428 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 ZC3H12AQ5D1E8 599 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 ACBD5Q5T8D3 534 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 TRNP1Q6NT89 227 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 DENND1CQ8IV53 801 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 CPA6Q8N4T0 437 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 DNASE1L2Q92874 299 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 AZIN2Q96A70 460 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 SLC39A13Q96H72 371 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 BTN2A3PQ96KV6 586 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 CALR3Q96L12 384 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 FCRL2Q96LA5 508 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 RPP25Q9BUL9 199 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 WDCPQ9H6R7 721 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 DUSP12Q9UNI6 340 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 WNT6Q9Y6F9 365 aa15.16■□□□□ 0.02
SCAMP4-209ENST00000585335 CCP110O43303 1012 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 ENDOD1O94919 500 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 MOCS2O96007 188 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 ADH1CP00326 375 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 CXCR3P49682 368 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 VAV2P52735 878 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 AMPD2Q01433 879 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 Q6ZNB5 142 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 BBS7Q8IWZ6 715 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 ACRBPQ8NEB7 543 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 SLC35G2Q8TBE7 412 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 NECAB3Q96P71 396 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 LRRC3BQ96PB8 259 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 TRPV5Q9NQA5 729 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 SLC2A4RGQ9NR83 387 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 PIGVQ9NUD9 493 aa15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 AGO1Q9UL18 857 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-209ENST00000585335 A0A0A6YYK5 440 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-209ENST00000585335 TYW5A2RUC4 315 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-209ENST00000585335 SCAMP3O14828 347 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-209ENST00000585335 ACSL4O60488 711 aa15.14■□□□□ 0.01
SCAMP4-209ENST00000585335 CYBBP04839 570 aa15.14■□□□□ 0.01
SCAMP4-209ENST00000585335 NOP2P46087 812 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-209ENST00000585335 KIF5AQ12840 1032 aa15.14■□□□□ 0.01
SCAMP4-209ENST00000585335 EML3Q32P44 896 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms