RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 NAT10Q9H0A0 1025 aaKnown RBP21.68■■□□□ 1.06
TOP3A-218ENST00000584669 ARRDC1-AS1Q9H2J1 176 aa21.68■■□□□ 1.06
TOP3A-218ENST00000584669 PLCB1Q9NQ66 1216 aa21.68■■□□□ 1.06
TOP3A-218ENST00000584669 PCDHGC3Q9UN70 934 aa21.68■■□□□ 1.06
TOP3A-218ENST00000584669 SIK3Q9Y2K2 1263 aa21.68■■□□□ 1.06
TOP3A-218ENST00000584669 LGALS16A8MUM7 142 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 K7EQS6 105 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 EPHB6O15197 1021 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 MSI1O43347 362 aaKnown RBP21.67■■□□□ 1.06
TOP3A-218ENST00000584669 KCNA4P22459 653 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 PDCLQ13371 301 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 AASDHQ4L235 1098 aaPredicted RBP21.67■■□□□ 1.06
TOP3A-218ENST00000584669 SMYD5Q6GMV2 418 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 MSANTD2Q6P1R3 559 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 DENND1CQ8IV53 801 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 ETFBKMTQ8IXQ9 262 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 TSTD1Q8NFU3 115 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 CCDC26Q8TAB7 109 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 PNKPQ96T60 521 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 BPIFA3Q9BQP9 254 aa21.67■■□□□ 1.06
TOP3A-218ENST00000584669 FAM207AQ9NSI2 230 aaPredicted RBP21.67■■□□□ 1.06
TOP3A-218ENST00000584669 SYCE3A1L190 88 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 NEDD8-MDP1E9PL57 170 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 F8VZ95 297 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 PAPSS1O43252 624 aaPredicted RBP21.66■■□□□ 1.06
TOP3A-218ENST00000584669 GDF9O60383 454 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 FYNP06241 537 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 EIF2DP41214 584 aaKnown RBP21.66■■□□□ 1.06
TOP3A-218ENST00000584669 SYCP1Q15431 976 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 TRIP4Q15650 581 aaPredicted RBP21.66■■□□□ 1.06
TOP3A-218ENST00000584669 TMEM110Q86TL2 294 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 PHTF2Q8N3S3 785 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 CCDC33Q8N5R6 958 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 C12orf50Q8NA57 414 aaPredicted RBP21.66■■□□□ 1.06
TOP3A-218ENST00000584669 C1orf131Q8NDD1 294 aaKnown RBP21.66■■□□□ 1.06
TOP3A-218ENST00000584669 USP33Q8TEY7 942 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 BHMTQ93088 406 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 PLD4Q96BZ4 506 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 P2RY11Q96G91 374 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 CPXM1Q96SM3 734 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 BBS2Q9BXC9 721 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 STK33Q9BYT3 514 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 DCLK3Q9C098 648 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 LHX5Q9H2C1 402 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 ARHGEF4Q9NR80 690 aa21.66■■□□□ 1.06
TOP3A-218ENST00000584669 AGO1Q9UL18 857 aaKnown RBP21.66■■□□□ 1.06
TOP3A-218ENST00000584669 LRRC10BA6NIK2 292 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 TRIM24O15164 1050 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 TULP3O75386 442 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 EPN2O95208 641 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 TYRP14679 529 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 CYP11B1P15538 503 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 KRT9P35527 623 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 DGKEP52429 567 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 BPIFB4P59827 614 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 POLR2FP61218 127 aaKnown RBP21.65■■□□□ 1.06
TOP3A-218ENST00000584669 UBXN1Q04323 297 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 SF3A2Q15428 464 aaKnown RBP21.65■■□□□ 1.06
TOP3A-218ENST00000584669 GOLGA1Q92805 767 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 FAM149B1Q96BN6 582 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 PIWIL1Q96J94 861 aaKnown RBP21.65■■□□□ 1.06
TOP3A-218ENST00000584669 LOXL4Q96JB6 756 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 NLRC4Q9NPP4 1024 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 PLK2Q9NYY3 685 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 NAALADL1Q9UQQ1 740 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 INVSQ9Y283 1065 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 ZNF510Q9Y2H8 683 aa21.65■■□□□ 1.06
TOP3A-218ENST00000584669 HBS1LQ9Y450 684 aaKnown RBP21.65■■□□□ 1.06
TOP3A-218ENST00000584669 FAM170AA1A519 330 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 SLC30A4O14863 429 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 DCLK1O15075 740 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 KAT7O95251 611 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 APODP05090 189 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 NCAM1P13591 858 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 GBP1P32455 592 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 ZNF165P49910 485 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 TAF3Q5VWG9 929 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 PPP1R13BQ96KQ4 1090 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 PCMTD1Q96MG8 357 aaPredicted RBP21.64■■□□□ 1.05
TOP3A-218ENST00000584669 TPSD1Q9BZJ3 242 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 SMOC1Q9H4F8 434 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 MARK1Q9P0L2 795 aa21.64■■□□□ 1.05
TOP3A-218ENST00000584669 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.63■■□□□ 1.05
TOP3A-218ENST00000584669 SART1O43290 800 aaKnown RBP21.63■■□□□ 1.05
TOP3A-218ENST00000584669 CACNG3O60359 315 aa21.63■■□□□ 1.05
TOP3A-218ENST00000584669 FOXD2O60548 495 aaPredicted RBP21.63■■□□□ 1.05
TOP3A-218ENST00000584669 GFPT2O94808 682 aa21.63■■□□□ 1.05
TOP3A-218ENST00000584669 ELF2Q15723 593 aa21.63■■□□□ 1.05
TOP3A-218ENST00000584669 SYPL2Q5VXT5 272 aa21.63■■□□□ 1.05
TOP3A-218ENST00000584669 ANO7Q6IWH7 933 aa21.63■■□□□ 1.05
TOP3A-218ENST00000584669 NOP9Q86U38 636 aaKnown RBP21.63■■□□□ 1.05
TOP3A-218ENST00000584669 DDX1Q92499 740 aaKnown RBP21.63■■□□□ 1.05
TOP3A-218ENST00000584669 DNAJC17Q9NVM6 304 aaKnown RBP21.63■■□□□ 1.05
TOP3A-218ENST00000584669 WDR35Q9P2L0 1181 aa21.63■■□□□ 1.05
TOP3A-218ENST00000584669 DEC1Q9P2X7 70 aa21.63■■□□□ 1.05
TOP3A-218ENST00000584669 CNOT1A5YKK6 2376 aaKnown RBP21.63■■□□□ 1.05
TOP3A-218ENST00000584669 TPRP12270 2363 aaKnown RBP21.63■■□□□ 1.05
TOP3A-218ENST00000584669 SMTNL1A8MU46 457 aa21.62■■□□□ 1.05
TOP3A-218ENST00000584669 ERBB2P04626 1255 aa21.62■■□□□ 1.05
TOP3A-218ENST00000584669 CHRM1P11229 460 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms