RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SMAD4Q13485 552 aaKnown RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 ZC3H12AQ5D1E8 599 aaKnown RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 ZNF569Q5MCW4 686 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 TXNRD3NBQ6F5E7 133 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 CYP4V2Q6ZWL3 525 aaPredicted RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 GET4Q7L5D6 327 aaPredicted RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 NT5DC3Q86UY8 548 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 ZSCAN30Q86W11 494 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 FAM131BQ86XD5 332 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 USP13Q92995 863 aaPredicted RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 CD101Q93033 1021 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 HLA-CQ95604 372 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 FCRL2Q96LA5 508 aaPredicted RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 SERPINB11Q96P15 392 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 PEBP4Q96S96 227 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 MYADMQ96S97 322 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 NACA2Q9H009 215 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 SMG9Q9H0W8 520 aaKnown RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 SLITRK6Q9H5Y7 841 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 ANLNQ9NQW6 1124 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 SMPD4Q9NXE4 827 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.92□□□□□ -0.82
RFFL-210ENST00000582308 GDE1Q9NZC3 331 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 LCMT1Q9UIC8 334 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 ZMYM5Q9UJ78 669 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 CDH7Q9ULB5 785 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 TLR6Q9Y2C9 796 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 HBS1LQ9Y450 684 aaKnown RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 CPQQ9Y646 472 aa9.92□□□□□ -0.82
RFFL-210ENST00000582308 SPTBN5Q9NRC6 3674 aaKnown RBP9.92□□□□□ -0.82
RFFL-210ENST00000582308 KIF26AQ9ULI4 1882 aaPredicted RBP9.91□□□□□ -0.82
RFFL-210ENST00000582308 KCNU1A8MYU2 1149 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 MBTPS2O43462 519 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 KIF5CO60282 957 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 GREM1O60565 184 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 STC2O76061 302 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 PRAMEF12O95522 483 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 FTCDO95954 541 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 KLKB1P03952 638 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 HMBSP08397 361 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 WEE1P30291 646 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 SLC1A1P43005 524 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 KPNA1P52294 538 aaPredicted RBP9.91□□□□□ -0.82
RFFL-210ENST00000582308 COG7P83436 770 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 SLC25A11Q02978 314 aaKnown RBP9.91□□□□□ -0.82
RFFL-210ENST00000582308 RING1Q06587 406 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 PPP2R5DQ14738 602 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 FAM78AQ5JUQ0 283 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 SCYL2Q6P3W7 929 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 SND1Q7KZF4 910 aaKnown RBP eCLIP9.91□□□□□ -0.82
RFFL-210ENST00000582308 ARID3BQ8IVW6 561 aaPredicted RBP9.91□□□□□ -0.82
RFFL-210ENST00000582308 SYCE1Q8N0S2 351 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 SLC35F6Q8N357 371 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 CCDC185Q8N715 623 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 TRIM58Q8NG06 486 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 MAFAQ8NHW3 353 aaPredicted RBP9.91□□□□□ -0.82
RFFL-210ENST00000582308 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.91□□□□□ -0.82
RFFL-210ENST00000582308 RIN3Q8TB24 985 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 ZSCAN18Q8TBC5 510 aaPredicted RBP9.91□□□□□ -0.82
RFFL-210ENST00000582308 NECTIN4Q96NY8 510 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 NCAPGQ9BPX3 1015 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 MAGEB5Q9BZ81 275 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 WDCPQ9H6R7 721 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 PRDM6Q9NQX0 595 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 TMPRSS4Q9NRS4 437 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 TDP1Q9NUW8 608 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 PCSK1NQ9UHG2 260 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 AMFRQ9UKV5 643 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 USP18Q9UMW8 372 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 ARHGAP26Q9UNA1 814 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 CCL26Q9Y258 94 aa9.91□□□□□ -0.82
RFFL-210ENST00000582308 TCF20Q9UGU0 1960 aaKnown RBP9.9□□□□□ -0.82
RFFL-210ENST00000582308 LEFTY2O00292 366 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 SPOPO43791 374 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 PRPSAP2O60256 369 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 IRF1P10914 325 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 TNNT1P13805 278 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 DESP17661 470 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 CCR1P32246 355 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 ADRA1BP35368 520 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 AVPR1AP37288 418 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 SSR1P43307 286 aaKnown RBP9.9□□□□□ -0.82
RFFL-210ENST00000582308 MARCKSL1P49006 195 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 GNG11P61952 73 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 LEXMQ3ZCV2 418 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 ATP13A4Q4VNC1 1196 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 BRMS1LQ5PSV4 323 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 MEI1Q5TIA1 1274 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 NYAP1Q6ZVC0 841 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 PEX26Q7Z412 305 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 SH3RF2Q8TEC5 729 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 KRT35Q92764 455 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 RNF34Q969K3 372 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 PLD4Q96BZ4 506 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 RSPRY1Q96DX4 576 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 ASB16Q96NS5 453 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 LRRC3BQ96PB8 259 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 ALS2CR12Q96Q35 445 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 WDR24Q96S15 920 aa9.9□□□□□ -0.82
RFFL-210ENST00000582308 TKTL2Q9H0I9 626 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms