RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 QKIQ96PU8 341 aaKnown RBP eCLIP11.52□□□□□ -0.572e-7■■■■□ 25.6
SKA2-204ENST00000578519 FAM107BQ9H098 131 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 ZCWPW1Q9H0M4 648 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 EPB41L4BQ9H329 900 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 SCUBE2Q9NQ36 999 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 AAASQ9NRG9 546 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 DDIT4Q9NX09 232 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 SAE1Q9UBE0 346 aaPredicted RBP11.52□□□□□ -0.57
SKA2-204ENST00000578519 SLC12A6Q9UHW9 1150 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 OGDHLQ9ULD0 1010 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 USP3Q9Y6I4 520 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 THSD7BQ9C0I4 1608 aa11.52□□□□□ -0.57
SKA2-204ENST00000578519 TRIP11Q15643 1979 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 SYNJ2BP-COX16A0A087WUM0 186 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 EXOC1LA0A1B0GW35 172 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 YJEFN3A6XGL0 299 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 HHLA1C9JL84 531 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 E7ENQ6 273 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 E7ESA3 106 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 I3L4J1 428 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 PSMD3O43242 534 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 CREB3O43889 395 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 OPHN1O60890 802 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 SHBGP04278 402 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 ETS1P14921 441 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 RBL1P28749 1068 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 RFC2P35250 354 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 CXCR3P49682 368 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 PSEN1P49768 467 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 RPL10AP62906 217 aaKnown RBP11.51□□□□□ -0.57
SKA2-204ENST00000578519 CAP1Q01518 475 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 AUHQ13825 339 aaKnown RBP11.51□□□□□ -0.57
SKA2-204ENST00000578519 PAFAH1B3Q15102 231 aaKnown RBP11.51□□□□□ -0.57
SKA2-204ENST00000578519 CA9Q16790 459 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 CTXN3Q4LDR2 81 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 CCDC38Q502W7 563 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 PAN2Q504Q3 1202 aaKnown RBP11.51□□□□□ -0.57
SKA2-204ENST00000578519 CLLU1OSQ5K130 101 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 LGSNQ5TDP6 509 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 CD300LGQ6UXG3 332 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 NPNTQ6UXI9 565 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 RFX8Q6ZV50 586 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 B4GALNT4Q76KP1 1039 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 TADA2BQ86TJ2 420 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 MON1AQ86VX9 555 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 CCNJLQ8IV13 435 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 SCN4BQ8IWT1 228 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 ZBED8Q8IZ13 594 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 NUP93Q8N1F7 819 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 LZTR1Q8N653 840 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 CCDC185Q8N715 623 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 ZMIZ2Q8NF64 920 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 SPPL2BQ8TCT7 592 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 ZBTB9Q96C00 473 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 TOX2Q96NM4 488 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 PPP1R2P1Q96PQ5 205 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 HAPLN3Q96S86 360 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 KCNK16Q96T55 309 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 VAT1Q99536 393 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 PKMYT1Q99640 499 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 RTP3Q9BQQ7 232 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 PAAF1Q9BRP4 392 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 RNF208Q9H0X6 261 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 UNC93B1Q9H1C4 597 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 OSBPL2Q9H1P3 480 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 EPN3Q9H201 632 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 USP29Q9HBJ7 922 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 XAB2Q9HCS7 855 aaKnown RBP11.51□□□□□ -0.57
SKA2-204ENST00000578519 RAB6BQ9NRW1 208 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 OLA1Q9NTK5 396 aaKnown RBP11.51□□□□□ -0.57
SKA2-204ENST00000578519 COX16Q9P0S2 106 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 LGALS13Q9UHV8 139 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 ADAM28Q9UKQ2 775 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 NAALADL1Q9UQQ1 740 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 IKBKGQ9Y6K9 419 aa11.51□□□□□ -0.57
SKA2-204ENST00000578519 SMIM23A6NLE4 172 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 TRDMT1O14717 391 aaKnown RBP11.5□□□□□ -0.57
SKA2-204ENST00000578519 NRP1O14786 923 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 TP73O15350 636 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 DGKIO75912 1065 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 DDHD2O94830 711 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 GOT1P17174 413 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 TPSB2P20231 275 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 AMPD1P23109 780 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 CCR1P32246 355 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 MAGEA6P43360 314 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 GLUD2P49448 558 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 YWHAGP61981 247 aaKnown RBP eCLIP11.5□□□□□ -0.57
SKA2-204ENST00000578519 ZNF33AQ06730 810 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 TPSAB1Q15661 275 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 ZSCAN26Q16670 478 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 BBS9Q3SYG4 887 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 SLC39A12Q504Y0 691 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 KCNT2Q6UVM3 1135 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 ANKS3Q6ZW76 656 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 ZNF280BQ86YH2 543 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 UHMK1Q8TAS1 419 aaKnown RBP11.5□□□□□ -0.57
SKA2-204ENST00000578519 HASPINQ8TF76 798 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 HTR3CQ8WXA8 447 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 SLC39A7Q92504 469 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms