RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 GOLGA7BQ2TAP0 167 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 PLEKHG6Q3KR16 790 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 KRBA2Q6ZNG9 492 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 TRMT11Q7Z4G4 463 aaKnown RBP12.62□□□□□ -0.39
PRPF8-215ENST00000576958 CYB5D2Q8WUJ1 264 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 EDEM1Q92611 657 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 MYEOVQ96EZ4 313 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 ZNF419Q96HQ0 510 aaPredicted RBP12.62□□□□□ -0.39
PRPF8-215ENST00000576958 SPATA32Q96LK8 384 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 ULBP1Q9BZM6 244 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 MIR1-1HGQ9H1L0 117 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 CYP3A43Q9HB55 503 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 WSB2Q9NYS7 404 aaPredicted RBP12.62□□□□□ -0.39
PRPF8-215ENST00000576958 USP36Q9P275 1121 aaKnown RBP12.62□□□□□ -0.39
PRPF8-215ENST00000576958 WDR35Q9P2L0 1181 aa12.62□□□□□ -0.39
PRPF8-215ENST00000576958 THAP10Q9P2Z0 257 aaPredicted RBP12.62□□□□□ -0.39
PRPF8-215ENST00000576958 TMEM131Q92545 1883 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 GOLGA6L7A0A1B0GV03 622 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 TRIM49BA6NDI0 452 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 OPHN1O60890 802 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 CAPNS1P04632 268 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 TPMTP51580 245 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 TKTL1P51854 596 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 ATXN3P54252 364 aaPredicted RBP12.61□□□□□ -0.39
PRPF8-215ENST00000576958 YWHAGP61981 247 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRPF8-215ENST00000576958 PDE4CQ08493 712 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 LRMPQ12912 555 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 PNOCQ13519 176 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 RAB41Q5JT25 222 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 KLHDC10Q6PID8 442 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 SLC36A4Q6YBV0 504 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 SLCO6A1Q86UG4 719 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 UBA3Q8TBC4 463 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 KCNV2Q8TDN2 545 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 CLEC4CQ8WTT0 213 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 ZSWIM1Q9BR11 485 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 PRDM16Q9HAZ2 1276 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 TMEM8AQ9HCN3 771 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 MARCH2Q9P0N8 246 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 CFAP45Q9UL16 551 aa12.61□□□□□ -0.39
PRPF8-215ENST00000576958 FNDC3AQ9Y2H6 1198 aaKnown RBP12.61□□□□□ -0.39
PRPF8-215ENST00000576958 BAHCC1Q9P281 2608 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 KNL1Q8NG31 2342 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 FAM237AA0A1B0GTK4 181 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 KCNK3O14649 394 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 NDUFS2O75306 463 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 NCAM1P13591 858 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 HOXD9P28356 352 aaPredicted RBP12.6□□□□□ -0.39
PRPF8-215ENST00000576958 CD6P30203 668 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 PSMC2P35998 433 aaKnown RBP12.6□□□□□ -0.39
PRPF8-215ENST00000576958 MXI1P50539 228 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 ENPP2Q13822 863 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 BYSLQ13895 437 aaKnown RBP12.6□□□□□ -0.39
PRPF8-215ENST00000576958 KCNT1Q5JUK3 1230 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 SPDYCQ5MJ68 293 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 DCAF12L1Q5VU92 463 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 SDE2Q6IQ49 451 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 INTS8Q75QN2 995 aaKnown RBP12.6□□□□□ -0.39
PRPF8-215ENST00000576958 TMPRSS6Q8IU80 811 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 HDDC3Q8N4P3 179 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 TFAP2BQ92481 460 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 KAT5Q92993 513 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 TMEM176AQ96HP8 235 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 CIPCQ9C0C6 399 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 SLC32A1Q9H598 525 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 C6orf106Q9H6K1 298 aaPredicted RBP12.6□□□□□ -0.39
PRPF8-215ENST00000576958 PNPLA8Q9NP80 782 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 DNAAF2Q9NVR5 837 aaKnown RBP12.6□□□□□ -0.39
PRPF8-215ENST00000576958 CLIC5Q9NZA1 410 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 EIF2B4Q9UI10 523 aaKnown RBP12.6□□□□□ -0.39
PRPF8-215ENST00000576958 SLC27A6Q9Y2P4 619 aa12.6□□□□□ -0.39
PRPF8-215ENST00000576958 ANKRD11Q6UB99 2663 aaPredicted RBP12.6□□□□□ -0.39
PRPF8-215ENST00000576958 ATRXP46100 2492 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 YJEFN3A6XGL0 299 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 MEI4A8MW99 385 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 E7ENQ6 273 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 MAPK13O15264 365 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 ZNF217O75362 1048 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 EPHX1P07099 455 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 RALAP11233 206 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 KRT13P13646 458 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 HLA-FP30511 346 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 ACSL1P33121 698 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 PRCPP42785 496 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 RGS7P49802 495 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 RING1Q06587 406 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 GOLGA8FQ08AF8 430 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 GOLGA8DPQ0D2H9 430 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 ADIGQ0VDE8 80 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 COL9A2Q14055 689 aaPredicted RBP12.59□□□□□ -0.39
PRPF8-215ENST00000576958 NFIL3Q16649 462 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 DCAF17Q5H9S7 520 aaPredicted RBP12.59□□□□□ -0.39
PRPF8-215ENST00000576958 KRT39Q6A163 491 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 RFWD3Q6PCD5 774 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 C19orf48Q6RUI8 117 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 RSRC2Q7L4I2 434 aaKnown RBP12.59□□□□□ -0.39
PRPF8-215ENST00000576958 RAB44Q7Z6P3 723 aaPredicted RBP12.59□□□□□ -0.39
PRPF8-215ENST00000576958 FMNL3Q8IVF7 1028 aa12.59□□□□□ -0.39
PRPF8-215ENST00000576958 NAXDQ8IW45 347 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms