RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	ZWILCH	Q9H900	591 aa		12.37	□□□□□ -0.43
PRPF8-212	ENST00000575116	HCFC1R1	Q9NWW0	138 aa		12.37	□□□□□ -0.43
PRPF8-212	ENST00000575116	ARHGEF38	Q9NXL2	777 aa		12.37	□□□□□ -0.43
PRPF8-212	ENST00000575116	SLC12A6	Q9UHW9	1150 aa		12.37	□□□□□ -0.43
PRPF8-212	ENST00000575116	RASAL2	Q9UJF2	1139 aa		12.37	□□□□□ -0.43
PRPF8-212	ENST00000575116	NUDT5	Q9UKK9	219 aa		12.37	□□□□□ -0.43
PRPF8-212	ENST00000575116	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.37	□□□□□ -0.43
PRPF8-212	ENST00000575116	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116		A0A1W2PRU2	124 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	SLC12A8	A0AV02	714 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	C2orf78	A6NCI8	922 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	KCNU1	A8MYU2	1149 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	ZNF487	B1APH4	448 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	URI1	O94763	535 aa	Predicted RBP	12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	APOE	P02649	317 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	KDELR1	P24390	212 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	WEE1	P30291	646 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	CCR2	P41597	374 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	MARCKSL1	P49006	195 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	ARSE	P51690	589 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	ATXN1	P54253	815 aa	Known RBP	12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	SLC7A9	P82251	487 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	RBM10	P98175	930 aa	Known RBP	12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	ADGRE1	Q14246	886 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	DPYSL2	Q16555	572 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	ATP13A4	Q4VNC1	1196 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	EFHC2	Q5JST6	749 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	PRSS36	Q5K4E3	855 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	NUGGC	Q68CJ6	796 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	TXNRD3NB	Q6F5E7	133 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	GRASP	Q7Z6J2	395 aa	Predicted RBP	12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	RASGEF1C	Q8N431	466 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	C12orf76	Q8N812	135 aa	Predicted RBP	12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	ATP6V0D2	Q8N8Y2	350 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	KCTD6	Q8NC69	237 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	SHKBP1	Q8TBC3	707 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	AZIN2	Q96A70	460 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	PLD4	Q96BZ4	506 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	C1orf74	Q96LT6	269 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	SNRNP25	Q9BV90	132 aa	Known RBP	12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	KLF16	Q9BXK1	252 aa	Predicted RBP	12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	NACA2	Q9H009	215 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	TKTL2	Q9H0I9	626 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	OSBPL2	Q9H1P3	480 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	TASP1	Q9H6P5	420 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	PRDM16	Q9HAZ2	1276 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	COX16	Q9P0S2	106 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	CDC23	Q9UJX2	597 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	AP4E1	Q9UPM8	1137 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	EFR3B	Q9Y2G0	817 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	OBSL1	O75147	1896 aa		12.36	□□□□□ -0.43
PRPF8-212	ENST00000575116	TRAV19	A0A0A6YYK7	116 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	LINC01565	O15544	149 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	MSI1	O43347	362 aa	Known RBP	12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	MOSPD3	O75425	235 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	KRT1	P04264	644 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	PYGM	P11217	842 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	MBL2	P11226	248 aa	Predicted RBP	12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	IGFBP4	P22692	258 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	L1CAM	P32004	1257 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	CXCR5	P32302	372 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	HTR7	P34969	479 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	PTPN7	P35236	360 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	GJC1	P36383	396 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	HCAR3	P49019	387 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	CYP4F8	P98187	520 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	NRG1	Q02297	640 aa	Predicted RBP	12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	PPP2R5E	Q16537	467 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	KCNT1	Q5JUK3	1230 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	RARS2	Q5T160	578 aa	Known RBP	12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	ZFYVE27	Q5T4F4	411 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	SEL1L2	Q5TEA6	688 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	TXNDC8	Q6A555	127 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	SYCE2	Q6PIF2	218 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	TMC5	Q6UXY8	1006 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	MIB1	Q86YT6	1006 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	CCDC185	Q8N715	623 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	MAB21L3	Q8N8X9	362 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	ACTRT1	Q8TDG2	376 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	HSPH1	Q92598	858 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	PABPC5	Q96DU9	382 aa	Known RBP	12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	LRCH3	Q96II8	777 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	BTN2A3P	Q96KV6	586 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	FCRL2	Q96LA5	508 aa	Predicted RBP	12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	NAP1L3	Q99457	506 aa	Predicted RBP	12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	SLC46A2	Q9BY10	475 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	ADAM7	Q9H2U9	754 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	TRPC7	Q9HCX4	862 aa		12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	RCOR3	Q9P2K3	495 aa	Predicted RBP	12.35	□□□□□ -0.43
PRPF8-212	ENST00000575116	MYO7A	Q13402	2215 aa		12.34	□□□□□ -0.43
PRPF8-212	ENST00000575116	LRRD1	A4D1F6	860 aa		12.34	□□□□□ -0.43
PRPF8-212	ENST00000575116	C3orf70	A6NLC5	250 aa	Predicted RBP	12.34	□□□□□ -0.43
PRPF8-212	ENST00000575116	CEP104	O60308	925 aa		12.34	□□□□□ -0.43
PRPF8-212	ENST00000575116	SRGAP2	O75044	1071 aa		12.34	□□□□□ -0.43
PRPF8-212	ENST00000575116	LATS1	O95835	1130 aa		12.34	□□□□□ -0.43
PRPF8-212	ENST00000575116	PAFAH1B1	P43034	410 aa		12.34	□□□□□ -0.43
PRPF8-212	ENST00000575116	HARS2	P49590	506 aa	Known RBP	12.34	□□□□□ -0.43
PRPF8-212	ENST00000575116	DNA2	P51530	1060 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms