RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 TBX20Q9UMR3 447 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 SRPK3Q9UPE1 567 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 PCDHA10Q9Y5I2 948 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 PFASO15067 1338 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 TMEM150BA6NC51 233 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 NFKBIEO00221 500 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 KRIT1O00522 736 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 PLOD3O60568 738 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 MMP20O60882 483 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 EOMESO95936 686 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 SUMO1P63165 101 aaKnown RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 DMP1Q13316 513 aaPredicted RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 MPP3Q13368 585 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 LRRC32Q14392 662 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 SLC14A2Q15849 920 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 CNGA2Q16280 664 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 PKN2Q16513 984 aaKnown RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 NBPF12Q5TAG4 269 aaPredicted RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 SAMD14Q8IZD0 417 aaPredicted RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 TMEM161BQ8NDZ6 487 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 REPS2Q8NFH8 660 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 ZSCAN18Q8TBC5 510 aaPredicted RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 PLEKHO2Q8TD55 490 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 PTPRN2Q92932 1015 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 C12orf42Q96LP6 360 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 NTPCRQ9BSD7 190 aaKnown RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 MAK16Q9BXY0 300 aaKnown RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 TMEM117Q9H0C3 514 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 VCXQ9H320 206 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 ZNF395Q9H8N7 513 aaPredicted RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 ZDHHC18Q9NUE0 388 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 SEPT11Q9NVA2 429 aaKnown RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 WBP1LQ9NX94 342 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 ATXN10Q9UBB4 475 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 CNOT7Q9UIV1 285 aaKnown RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 TMCO1Q9UM00 188 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 ZNF510Q9Y2H8 683 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 IGSF9BQ9UPX0 1349 aa8.35□□□□□ -1.07
TCF4-246ENST00000570287 BRCA1P38398 1863 aaKnown RBP8.35□□□□□ -1.07
TCF4-246ENST00000570287 DDX3YO15523 660 aaKnown RBP8.34□□□□□ -1.07
TCF4-246ENST00000570287 MTRF1O75570 445 aaKnown RBP8.34□□□□□ -1.07
TCF4-246ENST00000570287 SUN1O94901 812 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 HSD3B1P14060 373 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 GM2AP17900 193 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 NPTX2P47972 431 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 GMPSP49915 693 aaPredicted RBP8.34□□□□□ -1.07
TCF4-246ENST00000570287 ENPEPQ07075 957 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 DHX9Q08211 1270 aaKnown RBP8.34□□□□□ -1.07
TCF4-246ENST00000570287 KBTBD12Q3ZCT8 623 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 PLA2G4FQ68DD2 849 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 RNF43Q68DV7 783 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 LILRA6Q6PI73 481 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 ANO5Q75V66 913 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 CROCCP2Q86T23 111 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 KIF2BQ8N4N8 673 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 UCMAQ8WVF2 138 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 ATP6V0A1Q93050 837 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 OPTNQ96CV9 577 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 ARHGEF26Q96DR7 871 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 NAP1L3Q99457 506 aaPredicted RBP8.34□□□□□ -1.07
TCF4-246ENST00000570287 SH2D3AQ9BRG2 576 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 SORBS1Q9BX66 1292 aaKnown RBP8.34□□□□□ -1.07
TCF4-246ENST00000570287 THAP2Q9H0W7 228 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 CARD9Q9H257 536 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 PABPC3Q9H361 631 aaKnown RBP8.34□□□□□ -1.07
TCF4-246ENST00000570287 ZNF576Q9H609 170 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 INTS9Q9NV88 658 aaKnown RBP8.34□□□□□ -1.07
TCF4-246ENST00000570287 TAS2R14Q9NYV8 317 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 REV1Q9UBZ9 1251 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 ADAMTS5Q9UNA0 930 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 ARL2BPQ9Y2Y0 163 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 CCDC169A6NNP5 214 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 AGRPO00253 132 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 DAPK3O43293 454 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 SLITRK5O94991 958 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 ADRB2P07550 413 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 ADSSP30520 456 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 MAPK10P53779 464 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 SNRNP35Q16560 246 aaKnown RBP8.34□□□□□ -1.07
TCF4-246ENST00000570287 FAM205BPQ63HN1 556 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 TRIM68Q6AZZ1 485 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 MFSD5Q6N075 450 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 TMEM214Q6NUQ4 689 aaKnown RBP8.34□□□□□ -1.07
TCF4-246ENST00000570287 NLRC3Q7RTR2 1065 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 DEFB132Q7Z7B7 95 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 LCA5Q86VQ0 697 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 LRRC49Q8IUZ0 686 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 FAM71AQ8IYT1 594 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 CCDC116Q8IYX3 515 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 CAMKK1Q8N5S9 505 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 ZNF333Q96JL9 665 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 HAPLN3Q96S86 360 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 DPH5Q9H2P9 285 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 DCAF16Q9NXF7 216 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 TBC1D30Q9Y2I9 924 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 COQ4Q9Y3A0 265 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 RIPK3Q9Y572 518 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 NFASCO94856 1347 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 RLFQ13129 1914 aa8.34□□□□□ -1.07
TCF4-246ENST00000570287 PHIPQ8WWQ0 1821 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms