RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 MRPL38Q96DV4 380 aaKnown RBP6.9□□□□□ -1.31
SMG1-217ENST00000569764 NT5C1BQ96P26 610 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 ADAM2Q99965 735 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 INTS10Q9NVR2 710 aaKnown RBP6.9□□□□□ -1.31
SMG1-217ENST00000569764 TRPS1Q9UHF7 1281 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 KCNH3Q9ULD8 1083 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 R3HDM2Q9Y2K5 976 aaKnown RBP6.9□□□□□ -1.31
SMG1-217ENST00000569764 DNAH14Q0VDD8 3507 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 GOLGA6L9A6NEM1 432 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 HUS1O60921 280 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 SLITRK5O94991 958 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 FBXO45P0C2W1 286 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 CKBP12277 381 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 APEHP13798 732 aaKnown RBP6.9□□□□□ -1.31
SMG1-217ENST00000569764 PTGS1P23219 599 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 KLRC1P26715 233 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 PPARGP37231 505 aaPredicted RBP6.9□□□□□ -1.31
SMG1-217ENST00000569764 SYKP43405 635 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 EFCAB12Q6NXP0 572 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 PACS2Q86VP3 889 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 CEP57Q86XR8 500 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 FAM178BQ8IXR5 827 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 SMG7Q92540 1137 aaKnown RBP6.9□□□□□ -1.31
SMG1-217ENST00000569764 RPRD1AQ96P16 312 aaPredicted RBP6.9□□□□□ -1.31
SMG1-217ENST00000569764 NOC4LQ9BVI4 516 aaKnown RBP6.9□□□□□ -1.31
SMG1-217ENST00000569764 SLC32A1Q9H598 525 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 GPRC5BQ9NZH0 403 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 HESX1Q9UBX0 185 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 CORO2BQ9UQ03 480 aa6.9□□□□□ -1.31
SMG1-217ENST00000569764 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 DDX3XO00571 662 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMG1-217ENST00000569764 CAPN9O14815 690 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 RTN3O95197 1032 aaPredicted RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 SRGAP2CP0DJJ0 459 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 ICAM3P32942 547 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 BMPR1AP36894 532 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 ARPP19P56211 112 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 NLRP11P59045 1033 aaKnown RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 SNAP25P60880 206 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 ACTR2P61160 394 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 ZNF252P-AS1Q0IIN9 211 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 SSPNQ14714 243 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 SHHQ15465 462 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 NOMO2Q5JPE7 1267 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 C11orf88Q6PI97 169 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 SNX29Q8TEQ0 813 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 GIMAP5Q96F15 307 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 SGCZQ96LD1 299 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 CDX2Q99626 313 aaPredicted RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 TMEM175Q9BSA9 504 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 BBS2Q9BXC9 721 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 STMN4Q9H169 189 aaPredicted RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 ARFGAP3Q9NP61 516 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 TLR9Q9NR96 1032 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 SRPRBQ9Y5M8 271 aaKnown RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 UNC80Q8N2C7 3258 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 FAM221AA4D161 298 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 KRT86O43790 486 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 IQCF3P0C7M6 154 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 CD44P16070 742 aaKnown RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 MTIF2P46199 727 aaKnown RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 ZNF75DP51815 510 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 PMS2P54278 862 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 TNNC1P63316 161 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 CNTN2Q02246 1040 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 RNF219Q5W0B1 726 aaPredicted RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 RHPN2Q8IUC4 686 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 TTC16Q8NEE8 873 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 DBF4BQ8NFT6 615 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 RPGRIP1Q96KN7 1286 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 ASB2Q96Q27 587 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 PPP1R16BQ96T49 567 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 GDF15Q99988 308 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 DRC3Q9H069 523 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 TMEM206Q9H813 350 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 UBE2ZQ9H832 354 aaPredicted RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 CYP4F12Q9HCS2 524 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 CYP26B1Q9NR63 512 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 ARHGAP26Q9UNA1 814 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 XIRP2A4UGR9 3374 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 HNRNPRO43390 633 aaKnown RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 SRGAP2O75044 1071 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 ZC3H11AO75152 810 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMG1-217ENST00000569764 MYL4P12829 197 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 MCM7P33993 719 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 GLUD2P49448 558 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 HADHBP55084 474 aaKnown RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 OTUD4Q01804 1114 aaKnown RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 DOC2AQ14183 400 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 HABP2Q14520 560 aaPredicted RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 EFTUD2Q15029 972 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMG1-217ENST00000569764 TEAD4Q15561 434 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 LRRC26Q2I0M4 334 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 RRAGBQ5VZM2 374 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 NUDT13Q86X67 352 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 SMYD4Q8IYR2 804 aaPredicted RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 ZNF565Q8N9K5 539 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 ZSCAN1Q8NBB4 408 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 EHBP1Q8NDI1 1231 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 SPDYE1Q8NFV5 336 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms