RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 MED19A0JLT2 244 aaPredicted RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 PRR5-ARHGAP8B1AHC4 643 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 GDF9O60383 454 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 FGFR1OPO95684 399 aaKnown RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 LATS1O95835 1130 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 LTFP02788 710 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 LCP1P13796 627 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 HOXB2P14652 356 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 PON1P27169 355 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 CHKAP35790 457 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 MPLP40238 635 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 DGKGP49619 791 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 SGSHP51688 502 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 ATXN1P54253 815 aaKnown RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 ARHGAP8P85298 464 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 SF3A2Q15428 464 aaKnown RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 CCDC6Q16204 474 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 PREPLQ4J6C6 727 aaPredicted RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 FAM133BQ5BKY9 247 aaKnown RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 TMEM215Q68D42 235 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 TCEAL6Q6IPX3 200 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 KIAA1211LQ6NV74 962 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 RBM43Q6ZSC3 357 aaKnown RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 TRMT11Q7Z4G4 463 aaKnown RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 FRMD1Q8N878 549 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 NETO1Q8TDF5 533 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 HMGB4Q8WW32 186 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 TCEAL3Q969E4 200 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 PIWIL1Q96J94 861 aaKnown RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 XPO6Q96QU8 1125 aaKnown RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 SLC4A5Q9BY07 1137 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 DCLK3Q9C098 648 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 NUP62CLQ9H1M0 184 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 ARRDC1-AS1Q9H2J1 176 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 SMOC1Q9H4F8 434 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 THAP9Q9H5L6 903 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 UBE2TQ9NPD8 197 aaPredicted RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 ABCC13Q9NSE7 274 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 TJP2Q9UDY2 1190 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 MBD1Q9UIS9 605 aaPredicted RBP8.17□□□□□ -1.1
CDH3-209ENST00000569080 INVSQ9Y283 1065 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 SPEGQ15772 3267 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 PCDH15Q96QU1 1955 aa8.17□□□□□ -1.1
CDH3-209ENST00000569080 BCLAF3A2AJT9 711 aaKnown RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 E5RJQ4 531 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 SLC30A4O14863 429 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 PAPSS1O43252 624 aaPredicted RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 FBXO21O94952 628 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 IGLV3-25P01717 112 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 ZNF806P0C7X5 589 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 PNMA6AP0CW24 399 aaPredicted RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 KRT5P13647 590 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 NDUFV2P19404 249 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 ERCC5P28715 1186 aaPredicted RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 GNA15P30679 374 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 NTSR1P30989 418 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 WASP42768 502 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 LIMK1P53667 647 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 FOXK2Q01167 660 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 RING1Q06587 406 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 PDCLQ13371 301 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 NNTQ13423 1086 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 EIF4EBP2Q13542 120 aaPredicted RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 MAN2A1Q16706 1144 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 EXOC3L4Q17RC7 722 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 USP39Q53GS9 565 aaKnown RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 SMYD5Q6GMV2 418 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 NADSYN1Q6IA69 706 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 GBP6Q6ZN66 633 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 BEND5Q7L4P6 421 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 ENOSF1Q7L5Y1 443 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 DGLUCYQ7Z3D6 616 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 C11orf74Q86VG3 221 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 WDTC1Q8N5D0 677 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.16□□□□□ -1.1
CDH3-209ENST00000569080 WFDC5Q8TCV5 224 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 GPT2Q8TD30 523 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 DQX1Q8TE96 717 aaKnown RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 STK32AQ8WU08 396 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 ZNF606Q8WXB4 792 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 RLN3Q8WXF3 142 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 MYEOVQ96EZ4 313 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 SLC39A13Q96H72 371 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 FCRL2Q96LA5 508 aaPredicted RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 PRICKLE1Q96MT3 831 aaPredicted RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 POLMQ9NP87 494 aaPredicted RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 CD93Q9NPY3 652 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 CACNA2D2Q9NY47 1150 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 CALCOCO1Q9P1Z2 691 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 NYNRINQ9P2P1 1898 aaKnown RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 CDV3Q9UKY7 258 aaKnown RBP8.16□□□□□ -1.1
CDH3-209ENST00000569080 RAD54BQ9Y620 910 aa8.16□□□□□ -1.1
CDH3-209ENST00000569080 CEP192Q8TEP8 1941 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 FRYQ5TBA9 3013 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 LNP1A1A4G5 178 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 WASH3PC4AMC7 463 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 TM4SF5O14894 197 aa8.15□□□□□ -1.1
CDH3-209ENST00000569080 FOXD2O60548 495 aaPredicted RBP8.15□□□□□ -1.1
CDH3-209ENST00000569080 ALDH1A2O94788 518 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms