RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ATP11AP98196 1134 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 DEUP1Q05D60 604 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 RING1Q06587 406 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 NME3Q13232 169 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 C15orf59Q2T9L4 293 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-224ENST00000568877 ARHGAP29Q52LW3 1261 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 BNIPLQ7Z465 357 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 UNC45BQ8IWX7 931 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 OSCP1Q8WVF1 389 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 FCRL2Q96LA5 508 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-224ENST00000568877 DCLK3Q9C098 648 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 TMEM51Q9NW97 253 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 COX16Q9P0S2 106 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 CALCOCO1Q9P1Z2 691 aa17.43■□□□□ 0.38
COMMD4-224ENST00000568877 SLC9A3R1O14745 358 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-224ENST00000568877 SCAMP3O14828 347 aaKnown RBP17.42■□□□□ 0.38
COMMD4-224ENST00000568877 CHADO15335 359 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 ARHGAP6O43182 974 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 NRDCO43847 1150 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 ENDOD1O94919 500 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 KLKB1P03952 638 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 PTMAP06454 111 aaKnown RBP17.42■□□□□ 0.38
COMMD4-224ENST00000568877 OGDHQ02218 1023 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 CDO1Q16878 200 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 ZC3H12AQ5D1E8 599 aaKnown RBP17.42■□□□□ 0.38
COMMD4-224ENST00000568877 NUGGCQ68CJ6 796 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 SND1Q7KZF4 910 aaKnown RBP eCLIP17.42■□□□□ 0.38
COMMD4-224ENST00000568877 STRADAQ7RTN6 431 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 FNIP1Q8TF40 1166 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 CENPIQ92674 756 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-224ENST00000568877 ZFYVE19Q96K21 471 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 FAM83CQ9BQN1 747 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 CNPY3Q9BT09 278 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 TRIM7Q9C029 511 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 LINC00597Q9H2U6 94 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 BRD9Q9H8M2 597 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 PIGVQ9NUD9 493 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.42■□□□□ 0.38
COMMD4-224ENST00000568877 DUS2Q9NX74 493 aaKnown RBP17.42■□□□□ 0.38
COMMD4-224ENST00000568877 CTTNBP2NLQ9P2B4 639 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 TBC1D14Q9P2M4 693 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 UVRAGQ9P2Y5 699 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 SORCS3Q9UPU3 1222 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 ZNF510Q9Y2H8 683 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 REXO2Q9Y3B8 237 aaKnown RBP17.42■□□□□ 0.38
COMMD4-224ENST00000568877 WNT6Q9Y6F9 365 aa17.42■□□□□ 0.38
COMMD4-224ENST00000568877 HELZP42694 1942 aaKnown RBP17.41■□□□□ 0.38
COMMD4-224ENST00000568877 APOEP02649 317 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 SLC2A3P11169 496 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 PSMA2P25787 234 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 CCR1P32246 355 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 RDXP35241 583 aaKnown RBP17.41■□□□□ 0.38
COMMD4-224ENST00000568877 IFNAR2P48551 515 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 CXCR3P49682 368 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 KRT83P78385 493 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 CCZ1BP86790 482 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 CCZ1P86791 482 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-224ENST00000568877 PPP2R5DQ14738 602 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 PDGFRLQ15198 375 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 SH3PXD2AQ5TCZ1 1133 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 Q6ZNB5 142 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 DENND1CQ8IV53 801 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 BBS7Q8IWZ6 715 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 ACRBPQ8NEB7 543 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 ZNF564Q8TBZ8 553 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-224ENST00000568877 FAM172AQ8WUF8 416 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 RNF34Q969K3 372 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 OTUB2Q96DC9 234 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 ASIC4Q96FT7 647 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 ANAPC7Q9UJX3 599 aa17.41■□□□□ 0.38
COMMD4-224ENST00000568877 AGO1Q9UL18 857 aaKnown RBP17.41■□□□□ 0.38
COMMD4-224ENST00000568877 CCP110O43303 1012 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 NARSO43776 548 aaKnown RBP17.4■□□□□ 0.38
COMMD4-224ENST00000568877 LATS1O95835 1130 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 SRFP11831 508 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 DESP17661 470 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 ATXN1P54253 815 aaKnown RBP17.4■□□□□ 0.38
COMMD4-224ENST00000568877 CCDC173Q0VFZ6 552 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 TRIM68Q6AZZ1 485 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 RHOT2Q8IXI1 618 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 SLC35G2Q8TBE7 412 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 RFFLQ8WZ73 363 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 IRF7Q92985 503 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 AZIN2Q96A70 460 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 DESI2Q9BSY9 194 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 WDCPQ9H6R7 721 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 DUSP12Q9UNI6 340 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 TFR2Q9UP52 801 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 PAXBP1Q9Y5B6 917 aa17.4■□□□□ 0.38
COMMD4-224ENST00000568877 KCNU1A8MYU2 1149 aa17.39■□□□□ 0.37
COMMD4-224ENST00000568877 MYO1FO00160 1098 aa17.39■□□□□ 0.37
COMMD4-224ENST00000568877 ARNTLO00327 626 aa17.39■□□□□ 0.37
COMMD4-224ENST00000568877 SLC11A2P49281 568 aa17.39■□□□□ 0.37
COMMD4-224ENST00000568877 VAV2P52735 878 aa17.39■□□□□ 0.37
COMMD4-224ENST00000568877 HDAC4P56524 1084 aa17.39■□□□□ 0.37
COMMD4-224ENST00000568877 ZNF252P-AS1Q0IIN9 211 aa17.39■□□□□ 0.37
COMMD4-224ENST00000568877 TCEAL1Q15170 157 aa17.39■□□□□ 0.37
COMMD4-224ENST00000568877 EML3Q32P44 896 aa17.39■□□□□ 0.37
COMMD4-224ENST00000568877 RAB6CQ53S08 254 aa17.39■□□□□ 0.37
COMMD4-224ENST00000568877 BRMS1LQ5PSV4 323 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms