RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 CCINQ13939 588 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 TMEM196Q5HYL7 178 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 LY6G5CQ5SRR4 150 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 RNF43Q68DV7 783 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 ZNF852Q6ZMS4 543 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 MMS22LQ6ZRQ5 1243 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 TMEM25Q86YD3 366 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 ETFBKMTQ8IXQ9 262 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 PHTF2Q8N3S3 785 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 CPXM2Q8N436 756 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 FAM3CQ92520 227 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 GOLGA1Q92805 767 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 NPY6RQ99463 290 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 SPHK2Q9NRA0 654 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 TAS2R14Q9NYV8 317 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 CALCOCO1Q9P1Z2 691 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 LSM7Q9UK45 103 aaKnown RBP12.94□□□□□ -0.34
RNF40-211ENST00000567365 NENFQ9UMX5 172 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 TLR6Q9Y2C9 796 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 ZNF510Q9Y2H8 683 aa12.94□□□□□ -0.34
RNF40-211ENST00000567365 CACNA1IQ9P0X4 2223 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 GRAP2O75791 330 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 HMBSP08397 361 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 GZMAP12544 262 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 SKILP12757 684 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 FLT3P36888 993 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 EIF2DP41214 584 aaKnown RBP12.93□□□□□ -0.34
RNF40-211ENST00000567365 MATKP42679 507 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 RPS9P46781 194 aaKnown RBP12.93□□□□□ -0.34
RNF40-211ENST00000567365 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
RNF40-211ENST00000567365 MESP2Q0VG99 397 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 DCAF6Q58WW2 860 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 ACAD10Q6JQN1 1059 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 FSTL4Q6MZW2 842 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 WDR59Q6PJI9 974 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 C12orf40Q86WS4 652 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 DENND1CQ8IV53 801 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 MSANTD4Q8NCY6 345 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 TTC16Q8NEE8 873 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 FLCNQ8NFG4 579 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 ADAM32Q8TC27 787 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 PGAP3Q96FM1 320 aaPredicted RBP12.93□□□□□ -0.34
RNF40-211ENST00000567365 SERPINB11Q96P15 392 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 DNAJC7Q99615 494 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 C11orf70Q9BRQ4 267 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 MFSD1Q9H3U5 465 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 SYNCQ9H7C4 482 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 ARHGAP20Q9P2F6 1191 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 FBXO10Q9UK96 956 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 LUC7L2Q9Y383 392 aaKnown RBP12.93□□□□□ -0.34
RNF40-211ENST00000567365 SIT1Q9Y3P8 196 aa12.93□□□□□ -0.34
RNF40-211ENST00000567365 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.93□□□□□ -0.349e-10■■□□□ 12.4
RNF40-211ENST00000567365 A0A0A0MRY4 1105 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 FAM170AA1A519 330 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 FAM170BA6NMN3 283 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 KCNU1A8MYU2 1149 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 CACNG3O60359 315 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 ENDOD1O94919 500 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 ADH1CP00326 375 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 PENKP01210 267 aaPredicted RBP12.92□□□□□ -0.34
RNF40-211ENST00000567365 PLEKP08567 350 aaPredicted RBP12.92□□□□□ -0.34
RNF40-211ENST00000567365 ADH5P11766 374 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 TFE3P19532 575 aaPredicted RBP12.92□□□□□ -0.34
RNF40-211ENST00000567365 NSFP46459 744 aaKnown RBP12.92□□□□□ -0.34
RNF40-211ENST00000567365 GALK1P51570 392 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 TBX4P57082 545 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 KLHL30Q0D2K2 578 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 NR1H3Q13133 447 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 TRIM14Q14142 442 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 GAS6Q14393 721 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 FAM133BQ5BKY9 247 aaKnown RBP12.92□□□□□ -0.34
RNF40-211ENST00000567365 FAM102AQ5T9C2 384 aaPredicted RBP12.92□□□□□ -0.34
RNF40-211ENST00000567365 FYB2Q5VWT5 728 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 NADSYN1Q6IA69 706 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 SUGP1Q8IWZ8 645 aaKnown RBP12.92□□□□□ -0.34
RNF40-211ENST00000567365 DRC7Q8IY82 874 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 MCOLN2Q8IZK6 566 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 C3orf20Q8ND61 904 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 CPLX3Q8WVH0 158 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 VCPIP1Q96JH7 1222 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 ISCUQ9H1K1 167 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 RRN3Q9NYV6 651 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 ADAM22Q9P0K1 906 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 WDR35Q9P2L0 1181 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 MRPS17Q9Y2R5 130 aaKnown RBP12.92□□□□□ -0.34
RNF40-211ENST00000567365 BZW2Q9Y6E2 419 aaKnown RBP12.92□□□□□ -0.34
RNF40-211ENST00000567365 USP34Q70CQ2 3546 aa12.92□□□□□ -0.34
RNF40-211ENST00000567365 C2CD4BA6NLJ0 364 aa12.91□□□□□ -0.34
RNF40-211ENST00000567365 I6L893 689 aaPredicted RBP12.91□□□□□ -0.34
RNF40-211ENST00000567365 CAPN9O14815 690 aa12.91□□□□□ -0.34
RNF40-211ENST00000567365 SERPING1P05155 500 aa12.91□□□□□ -0.34
RNF40-211ENST00000567365 DCNP07585 359 aaKnown RBP12.91□□□□□ -0.34
RNF40-211ENST00000567365 TNFAIP3P21580 790 aa12.91□□□□□ -0.34
RNF40-211ENST00000567365 HARS2P49590 506 aaKnown RBP12.91□□□□□ -0.34
RNF40-211ENST00000567365 NUBP1P53384 320 aa12.91□□□□□ -0.34
RNF40-211ENST00000567365 CDK17Q00537 523 aa12.91□□□□□ -0.34
RNF40-211ENST00000567365 AMPD2Q01433 879 aa12.91□□□□□ -0.34
RNF40-211ENST00000567365 GAD2Q05329 585 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms