RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 DEFB119Q8N690 84 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 TRIML1Q8N9V2 468 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 DEFB124Q8NES8 71 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 BHMTQ93088 406 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 P2RY11Q96G91 374 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 ARID3AQ99856 593 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 LRRC4Q9HBW1 653 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 ELOVL2Q9NXB9 296 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 HESX1Q9UBX0 185 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 SUSD2Q9UGT4 822 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 CYP8B1Q9UNU6 501 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 HBS1LQ9Y450 684 aaKnown RBP15.7■□□□□ 0.1
RNF40-209ENST00000566703 RAD54BQ9Y620 910 aa15.7■□□□□ 0.1
RNF40-209ENST00000566703 CACNA1BQ00975 2339 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 ARHGAP33O14559 1287 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 PMM2O15305 246 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 OPHN1O60890 802 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 SMC2O95347 1197 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 HMBSP08397 361 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 GNSP15586 552 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 TBXAS1P24557 533 aaPredicted RBP15.69■□□□□ 0.1
RNF40-209ENST00000566703 CD6P30203 668 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 OXTRP30559 389 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 HARS2P49590 506 aaKnown RBP15.69■□□□□ 0.1
RNF40-209ENST00000566703 LRRC63Q05C16 580 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 PDE4CQ08493 712 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 BST2Q10589 180 aaKnown RBP15.69■□□□□ 0.1
RNF40-209ENST00000566703 FOXC1Q12948 553 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 SLC14A1Q13336 389 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 PNOCQ13519 176 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 GEN1Q17RS7 908 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 CBWD6Q4V339 395 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 MPPE1Q53F39 396 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 CBWD3Q5JTY5 395 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 WDR45BQ5MNZ6 344 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 CBWD5Q5RIA9 395 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 ANKRD40Q6AI12 368 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 ANKS1BQ7Z6G8 1248 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 SCML4Q8N228 414 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 CADM4Q8NFZ8 388 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 SPATA20Q8TB22 786 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 KCTD13Q8WZ19 329 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 DNASE2BQ8WZ79 361 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 HSPA12BQ96MM6 686 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 ULBP1Q9BZM6 244 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 PRDM16Q9HAZ2 1276 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 METTL14Q9HCE5 456 aaKnown RBP15.69■□□□□ 0.1
RNF40-209ENST00000566703 DNAAF2Q9NVR5 837 aaKnown RBP15.69■□□□□ 0.1
RNF40-209ENST00000566703 USP36Q9P275 1121 aaKnown RBP15.69■□□□□ 0.1
RNF40-209ENST00000566703 ARMCX3Q9UH62 379 aaPredicted RBP15.69■□□□□ 0.1
RNF40-209ENST00000566703 STOML2Q9UJZ1 356 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 TSPAN16Q9UKR8 245 aa15.69■□□□□ 0.1
RNF40-209ENST00000566703 ATXN2Q99700 1313 aaKnown RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 SYNCRIPO60506 623 aaKnown RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 LATS1O95835 1130 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 RDXP35241 583 aaKnown RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 IL12RB1P42701 662 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 FUT11Q495W5 492 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 DCAF17Q5H9S7 520 aaPredicted RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 BSPRYQ5W0U4 402 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 KIAA1324Q6UXG2 1013 aaKnown RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 BHLHA9Q7RTU4 235 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 RGL4Q8IZJ4 473 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 KDF1Q8NAX2 398 aaPredicted RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 RBBP8NLQ8NC74 664 aaPredicted RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 DDI1Q8WTU0 396 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 RNF139Q8WU17 664 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 TIGD1Q96MW7 591 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 GTPBP2Q9BX10 602 aaKnown RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 IRX2Q9BZI1 471 aaPredicted RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 ZDHHC5Q9C0B5 715 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 GDPD2Q9HCC8 539 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 CNGB3Q9NQW8 809 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 ABCC13Q9NSE7 274 aa15.68■□□□□ 0.1
RNF40-209ENST00000566703 WSB2Q9NYS7 404 aaPredicted RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 HOOK1Q9UJC3 728 aaKnown RBP15.68■□□□□ 0.1
RNF40-209ENST00000566703 TNRC6BQ9UPQ9 1833 aaKnown RBP15.67■□□□□ 0.1
RNF40-209ENST00000566703 TMEM8BA6NDV4 472 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 H0Y626 953 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 TRIM16O95361 564 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 IGLV3-19P01714 112 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 PAEPP09466 180 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 SETSIPP0DME0 302 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 C7P10643 843 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 PPP1R2P41236 205 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 ZNF234Q14588 700 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 GOLGA7BQ2TAP0 167 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 PKDCCQ504Y2 493 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 LCLAT1Q6UWP7 414 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 UNQ6494/PRO21346Q6UXR6 183 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 TMPRSS6Q8IU80 811 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 FMNL3Q8IVF7 1028 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 ELOA2Q8IYF1 753 aaPredicted RBP15.67■□□□□ 0.1
RNF40-209ENST00000566703 MINDY1Q8N5J2 469 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 UBR7Q8N806 425 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 ENGASEQ8NFI3 743 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 PRCCQ92733 491 aaPredicted RBP15.67■□□□□ 0.1
RNF40-209ENST00000566703 SMARCE1Q969G3 411 aa15.67■□□□□ 0.1
RNF40-209ENST00000566703 SLC35C1Q96A29 364 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms