RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 TKTL2Q9H0I9 626 aa18.36■□□□□ 0.53
HERC2-208ENST00000566635 TLR8Q9NR97 1041 aaKnown RBP18.36■□□□□ 0.53
HERC2-208ENST00000566635 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.36■□□□□ 0.53
HERC2-208ENST00000566635 COMMD8Q9NX08 183 aa18.36■□□□□ 0.53
HERC2-208ENST00000566635 CWC15Q9P013 229 aaKnown RBP18.36■□□□□ 0.53
HERC2-208ENST00000566635 FAM72CH0Y354 149 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 TGM5O43548 720 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 TBX18O95935 607 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 CA3P07451 260 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 HMGA1P17096 107 aaKnown RBP18.35■□□□□ 0.53
HERC2-208ENST00000566635 GGCXP38435 758 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 ALDH1A3P47895 512 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 FAM72AQ5TYM5 149 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 FAM72DQ6L9T8 149 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 MSANTD2Q6P1R3 559 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 FAM72BQ86X60 149 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 DDX42Q86XP3 938 aaKnown RBP eCLIP18.35■□□□□ 0.53
HERC2-208ENST00000566635 PSTKQ8IV42 348 aaKnown RBP18.35■□□□□ 0.53
HERC2-208ENST00000566635 TCEAL8Q8IYN2 117 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 PLD5Q8N7P1 536 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 POF1BQ8WVV4 589 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 RNF34Q969K3 372 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 TRIM31Q9BZY9 425 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 WDCPQ9H6R7 721 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 SSX2IPQ9Y2D8 614 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 INSL5Q9Y5Q6 135 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 HIDE1A8MVS5 230 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 BHMG1C9JSJ3 638 aaPredicted RBP18.35■□□□□ 0.53
HERC2-208ENST00000566635 ECEL1O95672 775 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 ZDHHC11BP0C7U3 371 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 GBP1P32455 592 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 ELF1P32519 619 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 EFEMP1Q12805 493 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 PLD1Q13393 1074 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 VSIG1Q86XK7 387 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 SPPL3Q8TCT6 385 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 RUBCNQ92622 972 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 CEP295NLQ96MC4 621 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 KLHL5Q96PQ7 755 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 DPH5Q9H2P9 285 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 HOMER3Q9NSC5 361 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 ARGLU1Q9NWB6 273 aaPredicted RBP18.35■□□□□ 0.53
HERC2-208ENST00000566635 LZTS1Q9Y250 596 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 MFHAS1Q9Y4C4 1052 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 CDH23Q9H251 3354 aa18.35■□□□□ 0.53
HERC2-208ENST00000566635 FAM187AA6NFU0 413 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 APOC4-APOC2K7ER74 178 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 CREB3O43889 395 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 SEC31AO94979 1220 aaKnown RBP18.34■□□□□ 0.53
HERC2-208ENST00000566635 APOC2P02655 101 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 CARSP49589 748 aaKnown RBP18.34■□□□□ 0.53
HERC2-208ENST00000566635 AIF1P55008 147 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 TFDP2Q14188 446 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 BRD3Q15059 726 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 ARL13BQ3SXY8 428 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 SLC9A4Q6AI14 798 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 C1orf228Q6PIY5 440 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 IFT81Q8WYA0 676 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 RUNDC3BQ96NL0 473 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 SERPINB11Q96P15 392 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 CCSER2Q9H7U1 834 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 CLIC5Q9NZA1 410 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 RWDD3Q9Y3V2 267 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 CCDC151A5D8V7 595 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 ZNF487B1APH4 448 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 APOL1O14791 398 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 MAP3K6O95382 1288 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 ARL4AP40617 200 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 PSEN1P49768 467 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 BYSLQ13895 437 aaKnown RBP18.34■□□□□ 0.53
HERC2-208ENST00000566635 IFT20Q8IY31 132 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 C10orf88Q9H8K7 445 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 ETNK2Q9NVF9 386 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 ARHGEF38Q9NXL2 777 aa18.34■□□□□ 0.53
HERC2-208ENST00000566635 UTP11Q9Y3A2 253 aaKnown RBP18.34■□□□□ 0.53
HERC2-208ENST00000566635 DAPK3O43293 454 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 TUBBP07437 444 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 CSH1P0DML2 217 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 CSH2P0DML3 217 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 AMPD1P23109 780 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 VCPP55072 806 aaKnown RBP18.33■□□□□ 0.52
HERC2-208ENST00000566635 OASLQ15646 514 aaKnown RBP18.33■□□□□ 0.52
HERC2-208ENST00000566635 C10orf120Q5SQS8 335 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 CCNI2Q6ZMN8 369 aaPredicted RBP18.33■□□□□ 0.52
HERC2-208ENST00000566635 PRUNE1Q86TP1 453 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 SLC35B2Q8TB61 432 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 SLCO2A1Q92959 643 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 ERP44Q9BS26 406 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 UBE2OQ9C0C9 1292 aaKnown RBP18.33■□□□□ 0.52
HERC2-208ENST00000566635 ARHGEF4Q9NR80 690 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 TLR9Q9NR96 1032 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 RASAL2Q9UJF2 1139 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 YBX2Q9Y2T7 364 aaKnown RBP18.33■□□□□ 0.52
HERC2-208ENST00000566635 NR2E3Q9Y5X4 410 aa18.33■□□□□ 0.52
HERC2-208ENST00000566635 C2orf71A6NGG8 1288 aa18.32■□□□□ 0.52
HERC2-208ENST00000566635 C5orf67F2Z3F1 127 aa18.32■□□□□ 0.52
HERC2-208ENST00000566635 H3BRJ5 948 aa18.32■□□□□ 0.52
HERC2-208ENST00000566635 GRM6O15303 877 aa18.32■□□□□ 0.52
HERC2-208ENST00000566635 ADH1AP07327 375 aa18.32■□□□□ 0.52
HERC2-208ENST00000566635 MCM3P25205 808 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms