RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ARHGEF3Q9NR81 526 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 LIN7CQ9NUP9 197 aaKnown RBP3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 RLIMQ9NVW2 624 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ALKBH4Q9NXW9 302 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 JKAMPQ9P055 326 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 WDR35Q9P2L0 1181 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 DKK4Q9UBT3 224 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 SUFUQ9UMX1 484 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 CDY1Q9Y6F8 540 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 KCNE2Q9Y6J6 123 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 ZMYM3Q14202 1370 aa3.59□□□□□ -1.83
HERPUD1-211ENST00000566550 NOTOA8MTQ0 251 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 MYO1GB0I1T2 1018 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 K7ESM1 405 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ABLIM1O14639 778 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 CPLX1O14810 134 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 PSMA7O14818 248 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 SEPT4O43236 478 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 AKAP8O43823 692 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 TBX10O75333 385 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ENTPD3O75355 529 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 KLHL18O94889 574 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 PDE8BO95263 885 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 GASTP01350 101 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 QDPRP09417 244 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 XRCC6P12956 609 aaKnown RBP eCLIP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ATF7P17544 494 aaPredicted RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 DESP17661 470 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 SAT1P21673 171 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 MCM3P25205 808 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 PSMA4P25789 261 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 EEF1DP29692 281 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 CD6P30203 668 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ICAM3P32942 547 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 PSMB10P40306 273 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 CAPZA2P47755 286 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 LMAN1P49257 510 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 CLCN2P51788 898 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 PTTG1IPP53801 180 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 RAD23AP54725 363 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 CDH15P55291 814 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 LILRA4P59901 499 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 POLR2FP61218 127 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ZXDAP98168 799 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 SATB1Q01826 763 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 PTH1RQ03431 593 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 COASYQ13057 564 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 EIF2B5Q13144 721 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 DUSP8Q13202 625 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 NFE2L1Q14494 772 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 SLMAPQ14BN4 828 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 NAA25Q14CX7 972 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ACAP1Q15027 740 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 E2F5Q15329 346 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF750Q32MQ0 723 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 MGAT5BQ3V5L5 792 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 TRIM60Q495X7 471 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF805Q5CZA5 627 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 KRBOX4Q5JUW0 171 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF569Q5MCW4 686 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ADGRF1Q5T601 910 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 NAA35Q5VZE5 725 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM200BQ69YZ2 307 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 TTI2Q6NXR4 508 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ALKBH5Q6P6C2 394 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 CNSTQ6PJW8 725 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC30A9Q6PML9 568 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 LAYNQ6UX15 382 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 SEM1Q6ZVN7 128 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 MCM10Q7L590 875 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF804AQ7Z570 1209 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 MIB1Q86YT6 1006 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 BRSK2Q8IWQ3 736 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 UNC45BQ8IWX7 931 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 OR5M3Q8NGP4 307 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 GPR150Q8NGU9 434 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 DNAJB14Q8TBM8 379 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 SH3RF3Q8TEJ3 882 aaPredicted RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 GCDHQ92947 438 aaPredicted RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF653Q96CK0 615 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ELP4Q96EB1 424 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 PHACTR3Q96KR7 559 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 EIF3CQ99613 913 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 NDC1Q9BTX1 674 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 CLPBQ9H078 707 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 EPC1Q9H2F5 836 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 DEF6Q9H4E7 631 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 GSTO2Q9H4Y5 243 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 OPA3Q9H6K4 179 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 KAT14Q9H8E8 782 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 ERVMER34-1Q9H9K5 563 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 GPR35Q9HC97 309 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC35C2Q9NQQ7 365 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 TLR8Q9NR97 1041 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 DECR2Q9NUI1 292 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 C5AR2Q9P296 337 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 DNMT3BQ9UBC3 853 aaKnown RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 DNAJB11Q9UBS4 358 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 HESX1Q9UBX0 185 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 MBD1Q9UIS9 605 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms