RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 BIRC3Q13489 604 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 NCOA4Q13772 614 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 ENPP2Q13822 863 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 C12orf56Q8IXR9 622 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 C12orf29Q8N999 325 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 CADM4Q8NFZ8 388 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 C1orf216Q8TAB5 229 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 BAHD1Q8TBE0 780 aaPredicted RBP14.09□□□□□ -0.15
COMMD4-214ENST00000566230 PARD3BQ8TEW8 1205 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 HNRNPLLQ8WVV9 542 aaKnown RBP14.09□□□□□ -0.15
COMMD4-214ENST00000566230 BBC3Q96PG8 261 aaPredicted RBP14.09□□□□□ -0.15
COMMD4-214ENST00000566230 GAREM1Q9H706 876 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 TOR4AQ9NXH8 423 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 THAP10Q9P2Z0 257 aaPredicted RBP14.09□□□□□ -0.15
COMMD4-214ENST00000566230 LSM7Q9UK45 103 aaKnown RBP14.09□□□□□ -0.15
COMMD4-214ENST00000566230 SCML2Q9UQR0 700 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 SLC27A6Q9Y2P4 619 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 RAXQ9Y2V3 346 aa14.09□□□□□ -0.15
COMMD4-214ENST00000566230 LRRIQ3A6PVS8 624 aaPredicted RBP14.08□□□□□ -0.16
COMMD4-214ENST00000566230 METTL12A8MUP2 240 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 MEI4A8MW99 385 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 EXOC3O60645 756 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 STC2O76061 302 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 DKK1O94907 266 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 KLKB1P03952 638 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 ATXN1LP0C7T5 689 aaKnown RBP14.08□□□□□ -0.16
COMMD4-214ENST00000566230 PRR29P0C7W0 189 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 ZNF883P0CG24 379 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 IL12RB1P42701 662 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 PLA2G4AP47712 749 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 TPMTP51580 245 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 NDST1P52848 882 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 GEN1Q17RS7 908 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 DCAF12L1Q5VU92 463 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 KLHDC10Q6PID8 442 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 DBX2Q6ZNG2 339 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 TMPRSS7Q7RTY8 843 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 MARCH9Q86YJ5 346 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 KIAA0895Q8NCT3 520 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 SPATA20Q8TB22 786 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 SETD7Q8WTS6 366 aaKnown RBP14.08□□□□□ -0.16
COMMD4-214ENST00000566230 MIR1-1HGQ9H1L0 117 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.08□□□□□ -0.16
COMMD4-214ENST00000566230 FAM49BQ9NUQ9 324 aa14.08□□□□□ -0.16
COMMD4-214ENST00000566230 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.08□□□□□ -0.16
COMMD4-214ENST00000566230 FNDC3AQ9Y2H6 1198 aaKnown RBP14.08□□□□□ -0.16
COMMD4-214ENST00000566230 SHROOM3Q8TF72 1996 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 A0A1W2PQH9 124 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 BCAT2O15382 392 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-214ENST00000566230 CILPO75339 1184 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 PENKP01210 267 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-214ENST00000566230 RARGP13631 454 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 ADORA2BP29275 332 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 MFAP3P55082 362 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 DLG4P78352 724 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 GOLGA8FQ08AF8 430 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 GOLGA8DPQ0D2H9 430 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 PNOCQ13519 176 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 STARD3Q14849 445 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 HLA-BQ31612 363 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 FYB2Q5VWT5 728 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 CLEC20AQ6ZU45 233 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 SCD5Q86SK9 330 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 TMPRSS6Q8IU80 811 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 SLC9A9Q8IVB4 645 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 GUF1Q8N442 669 aaKnown RBP14.07□□□□□ -0.16
COMMD4-214ENST00000566230 SMARCE1Q969G3 411 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 JAKMIP2Q96AA8 810 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 TM7SF3Q9NS93 570 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 EIF2B4Q9UI10 523 aaKnown RBP14.07□□□□□ -0.16
COMMD4-214ENST00000566230 DNMT3LQ9UJW3 386 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 PCDHA5Q9Y5H7 936 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 SLCO1B1Q9Y6L6 691 aa14.07□□□□□ -0.16
COMMD4-214ENST00000566230 CALUO43852 315 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-214ENST00000566230 IGLV3-19P01714 112 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 FAM200BP0CF97 657 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 MATKP42679 507 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 COPAP53621 1224 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 AP3M2P53677 418 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 SGSM1Q2NKQ1 1148 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 C10orf120Q5SQS8 335 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 ZNF658Q5TYW1 1059 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-214ENST00000566230 SPOPLQ6IQ16 392 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 UNC93AQ86WB7 457 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 RBBP8NLQ8NC74 664 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-214ENST00000566230 SIPA1Q96FS4 1042 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 PIWIL1Q96J94 861 aaKnown RBP14.06□□□□□ -0.16
COMMD4-214ENST00000566230 TWNKQ96RR1 684 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 HNRNPABQ99729 332 aaKnown RBP14.06□□□□□ -0.16
COMMD4-214ENST00000566230 KCTD10Q9H3F6 313 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 SCUBE2Q9NQ36 999 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 DMAC2Q9NW81 257 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 DKK4Q9UBT3 224 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 CLEC4EQ9ULY5 219 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 TRAF3IP3Q9Y228 551 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 BTBD3Q9Y2F9 522 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 KALRNO60229 2985 aa14.06□□□□□ -0.16
COMMD4-214ENST00000566230 TP53BP1Q12888 1972 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-214ENST00000566230 A0A1B0GVT2 93 aa14.05□□□□□ -0.16
COMMD4-214ENST00000566230 NPC1O15118 1278 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms