RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 ARHGAP15Q53QZ3 475 aa4.05□□□□□ -1.76
PALB2-204ENST00000566069 TMTC4Q5T4D3 741 aa4.05□□□□□ -1.76
PALB2-204ENST00000566069 L1TD1Q5T7N2 865 aaKnown RBP4.05□□□□□ -1.76
PALB2-204ENST00000566069 PGBD2Q6P3X8 592 aa4.05□□□□□ -1.76
PALB2-204ENST00000566069 CNGA4Q8IV77 575 aa4.05□□□□□ -1.76
PALB2-204ENST00000566069 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.05□□□□□ -1.76
PALB2-204ENST00000566069 ENAHQ8N8S7 591 aaPredicted RBP4.05□□□□□ -1.76
PALB2-204ENST00000566069 PNLDC1Q8NA58 520 aaKnown RBP4.05□□□□□ -1.76
PALB2-204ENST00000566069 SMRP1Q8NCR6 262 aa4.05□□□□□ -1.76
PALB2-204ENST00000566069 IPO4Q8TEX9 1081 aaKnown RBP4.05□□□□□ -1.76
PALB2-204ENST00000566069 GRAMD1AQ96CP6 724 aa4.05□□□□□ -1.76
PALB2-204ENST00000566069 VPS50Q96JG6 964 aa4.05□□□□□ -1.76
PALB2-204ENST00000566069 MARK4Q96L34 752 aa4.05□□□□□ -1.76
PALB2-204ENST00000566069 MAGED2Q9UNF1 606 aaPredicted RBP4.05□□□□□ -1.76
PALB2-204ENST00000566069 DTNAQ9Y4J8 743 aa4.05□□□□□ -1.76
PALB2-204ENST00000566069 WDR17Q8IZU2 1322 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 MYMKA6NI61 221 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 F5H423 210 aaPredicted RBP4.04□□□□□ -1.76
PALB2-204ENST00000566069 CBFA2T3O75081 653 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 SKAP2O75563 359 aaPredicted RBP4.04□□□□□ -1.76
PALB2-204ENST00000566069 LDHAP00338 332 aaKnown RBP4.04□□□□□ -1.76
PALB2-204ENST00000566069 FPR3P25089 353 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 MCM5P33992 734 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 DGKQP52824 942 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 ICA1Q05084 483 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 CHAF1AQ13111 956 aaPredicted RBP4.04□□□□□ -1.76
PALB2-204ENST00000566069 MTAPQ13126 283 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 RNASE12Q5GAN4 147 aaKnown RBP4.04□□□□□ -1.76
PALB2-204ENST00000566069 KIAA1161Q6NSJ0 714 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 TLDC1Q6P9B6 456 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 KIRREL2Q6UWL6 708 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 TRIM72Q6ZMU5 477 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 SKAP1Q86WV1 359 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 RASGRP3Q8IV61 690 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 NANOGP1Q8N7R0 232 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 RBMXL3Q8N7X1 1067 aaKnown RBP4.04□□□□□ -1.76
PALB2-204ENST00000566069 PNPLA1Q8N8W4 532 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 ZNF527Q8NB42 609 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 VPS37AQ8NEZ2 397 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 NSMCE1Q8WV22 266 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 POF1BQ8WVV4 589 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 COQ8BQ96D53 544 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 DAZAP1Q96EP5 407 aaKnown RBP4.04□□□□□ -1.76
PALB2-204ENST00000566069 RITA1Q96K30 269 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 ASB2Q96Q27 587 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 PPP1R10Q96QC0 940 aaKnown RBP4.04□□□□□ -1.76
PALB2-204ENST00000566069 SNX18Q96RF0 628 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 NUDT22Q9BRQ3 303 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 HELLSQ9NRZ9 838 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 TRNAU1APQ9NX07 287 aaKnown RBP4.04□□□□□ -1.76
PALB2-204ENST00000566069 WWOXQ9NZC7 414 aa4.04□□□□□ -1.76
PALB2-204ENST00000566069 H7C1Q1 480 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 FCHO1O14526 889 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 PCDH17O14917 1159 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 ZSCAN9O15535 394 aaPredicted RBP4.03□□□□□ -1.76
PALB2-204ENST00000566069 DHHO43323 396 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 PDE8BO95263 885 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 NPPBP16860 134 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 DIO1P49895 249 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 TXNL4AP83876 142 aaKnown RBP4.03□□□□□ -1.76
PALB2-204ENST00000566069 HOXA4Q00056 320 aaPredicted RBP4.03□□□□□ -1.76
PALB2-204ENST00000566069 LMAN2Q12907 356 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 PUM3Q15397 648 aaKnown RBP4.03□□□□□ -1.76
PALB2-204ENST00000566069 AASDHQ4L235 1098 aaPredicted RBP4.03□□□□□ -1.76
PALB2-204ENST00000566069 TMEM63BQ5T3F8 832 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 NAPRTQ6XQN6 538 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 CLASRPQ8N2M8 674 aaKnown RBP4.03□□□□□ -1.76
PALB2-204ENST00000566069 LINC01465Q8N7H1 131 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 TERB1Q8NA31 727 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 FAM71BQ8TC56 605 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 MMS19Q96T76 1030 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 CIPCQ9C0C6 399 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 RXFP3Q9NSD7 469 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 IGSF9Q9P2J2 1179 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 KLHL13Q9P2N7 655 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 MGAT4CQ9UBM8 478 aa4.03□□□□□ -1.76
PALB2-204ENST00000566069 TRIP12Q14669 1992 aaPredicted RBP4.03□□□□□ -1.76
PALB2-204ENST00000566069 LY6G6EA0A0G2JKS1 128 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 AQP12BA6NM10 295 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 SYT5O00445 386 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 PIP5K1BO14986 540 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 NPC1O15118 1278 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 NTSR2O95665 410 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 FGBP02675 491 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 ITGA5P08648 1049 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 SRGAP2BP0DMP2 458 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 DRD1P21728 446 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 ATP5F1P24539 256 aaPredicted RBP4.02□□□□□ -1.77
PALB2-204ENST00000566069 YY1P25490 414 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 PDIA3P30101 505 aaKnown RBP4.02□□□□□ -1.77
PALB2-204ENST00000566069 PBX1P40424 430 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 THBS3P49746 956 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 PLCD1P51178 756 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 RENBPP51606 427 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 NANOS2P60321 138 aaKnown RBP4.02□□□□□ -1.77
PALB2-204ENST00000566069 DEUP1Q05D60 604 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 BLMHQ13867 455 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 PTK2BQ14289 1009 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 KCNJ12Q14500 433 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms