RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 FAM173BQ6P4H8 233 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 GPRIN1Q7Z2K8 1008 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 CCDC186Q7Z3E2 898 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 PDCD7Q8N8D1 485 aaKnown RBP13.42□□□□□ -0.26
RNF40-208ENST00000565995 UCMAQ8WVF2 138 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 PRCCQ92733 491 aaPredicted RBP13.42□□□□□ -0.26
RNF40-208ENST00000565995 ERLEC1Q96DZ1 483 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 LRIG1Q96JA1 1093 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 USP28Q96RU2 1077 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 SLC2A11Q9BYW1 496 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 DMAC2Q9NW81 257 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 PLK2Q9NYY3 685 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 CLIC5Q9NZA1 410 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 USP3Q9Y6I4 520 aa13.42□□□□□ -0.26
RNF40-208ENST00000565995 LRRIQ3A6PVS8 624 aaPredicted RBP13.41□□□□□ -0.26
RNF40-208ENST00000565995 TK2O00142 265 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 CYP26A1O43174 497 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 TNFSF14O43557 240 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 P4HA1P13674 534 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 CASP4P49662 377 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 AFF3P51826 1226 aaKnown RBP13.41□□□□□ -0.26
RNF40-208ENST00000565995 KIF11P52732 1056 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 NDST1P52848 882 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 COG7P83436 770 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 CEBPZQ03701 1054 aaKnown RBP13.41□□□□□ -0.26
RNF40-208ENST00000565995 CYP4F3Q08477 520 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 PDE4CQ08493 712 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 INCA1Q0VD86 236 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 ORC1Q13415 861 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 CAMK2GQ13555 558 aaPredicted RBP13.41□□□□□ -0.26
RNF40-208ENST00000565995 ZNF234Q14588 700 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 KNOP1Q1ED39 458 aaKnown RBP13.41□□□□□ -0.26
RNF40-208ENST00000565995 UNC13DQ70J99 1090 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 SCD5Q86SK9 330 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 TADA2BQ86TJ2 420 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 SLC9A9Q8IVB4 645 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 FAM217AQ8IXS0 508 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 CPXM2Q8N436 756 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 C12orf29Q8N999 325 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
RNF40-208ENST00000565995 CDK5RAP1Q96SZ6 601 aaKnown RBP13.41□□□□□ -0.26
RNF40-208ENST00000565995 DCLK3Q9C098 648 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 MIR1-1HGQ9H1L0 117 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 ELOVL2Q9NXB9 296 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 TFIP11Q9UBB9 837 aaKnown RBP13.41□□□□□ -0.26
RNF40-208ENST00000565995 BTBD3Q9Y2F9 522 aa13.41□□□□□ -0.26
RNF40-208ENST00000565995 A0A1B0GVT2 93 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 PVALEFA0A1B0GWK0 134 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 A0A1W2PQH9 124 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 SYNCRIPO60506 623 aaKnown RBP13.4□□□□□ -0.26
RNF40-208ENST00000565995 EXOC3O60645 756 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 ASS1P00966 412 aaKnown RBP13.4□□□□□ -0.26
RNF40-208ENST00000565995 FAM200BP0CF97 657 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 SYT1P21579 422 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 GRIA4P48058 902 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 CSNK1EP49674 416 aaKnown RBP13.4□□□□□ -0.26
RNF40-208ENST00000565995 ASIC1P78348 528 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 BIRC3Q13489 604 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 ZACNQ401N2 412 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 C10orf120Q5SQS8 335 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 TMEM215Q68D42 235 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 ANKS1BQ7Z6G8 1248 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 NELFCDQ8IXH7 590 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 LINC00301Q8NCQ3 95 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 CYFIP2Q96F07 1278 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 HMGXB4Q9UGU5 601 aa13.4□□□□□ -0.26
RNF40-208ENST00000565995 TDRD6O60522 2096 aaKnown RBP13.4□□□□□ -0.27
RNF40-208ENST00000565995 IKBKBO14920 756 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 MDM4O15151 490 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 STX6O43752 255 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 TSPAN3O60637 253 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 PPP6R2O75170 966 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 ACADMP11310 421 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 PRKCHP24723 683 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 GRK6P43250 576 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 ASPAP45381 313 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 KIF19Q2TAC6 998 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 SCARA5Q6ZMJ2 495 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 IQUBQ8NA54 791 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 LSM14AQ8ND56 463 aaKnown RBP13.39□□□□□ -0.27
RNF40-208ENST00000565995 GOLGA5Q8TBA6 731 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 ADAM32Q8TC27 787 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 BHMTQ93088 406 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 IGSF8Q969P0 613 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 COL26A1Q96A83 441 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 UBL7Q96S82 380 aaPredicted RBP13.39□□□□□ -0.27
RNF40-208ENST00000565995 TMEM245Q9H330 911 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 ZSCAN16Q9H4T2 348 aaPredicted RBP13.39□□□□□ -0.27
RNF40-208ENST00000565995 MAGEF1Q9HAY2 307 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 NUDT5Q9UKK9 219 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 CLEC4EQ9ULY5 219 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 ANKRD6Q9Y2G4 727 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.39□□□□□ -0.27
RNF40-208ENST00000565995 SNX11Q9Y5W9 270 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 SLCO1B1Q9Y6L6 691 aa13.39□□□□□ -0.27
RNF40-208ENST00000565995 COL6A6A6NMZ7 2263 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 DFNA5O60443 496 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 RALAP11233 206 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 ACSL1P33121 698 aa13.38□□□□□ -0.27
RNF40-208ENST00000565995 ZBTB16Q05516 673 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms