RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CREBRFQ8IUR6 639 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 C12orf56Q8IXR9 622 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 DEFB119Q8N690 84 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 FRMD1Q8N878 549 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 TRIML1Q8N9V2 468 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 XXYLT1Q8NBI6 393 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 LNX1Q8TBB1 728 aaPredicted RBP6.58□□□□□ -1.36
UBFD1-204ENST00000565634 SEMA4DQ92854 862 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 ELSPBP1Q96BH3 223 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 CCDC127Q96BQ5 260 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 HVCN1Q96D96 273 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 OSBPL2Q9H1P3 480 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 TMEM206Q9H813 350 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 ANO10Q9NW15 660 aa6.58□□□□□ -1.36
UBFD1-204ENST00000565634 LRRIQ3A6PVS8 624 aaPredicted RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 HEPACAM2A8MVW5 462 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 DDX3YO15523 660 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 TEX33O43247 280 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 CALUO43852 315 aaPredicted RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 KALRNO60229 2985 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 EXOC3O60645 756 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 KIF4AO95239 1232 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 PAPLNO95428 1278 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 CALCAP01258 141 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 C4BPAP04003 597 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 RPLP1P05386 114 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 CLTAP09496 248 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 ZNF18P17022 549 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 PSMC3P17980 439 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 PTMSP20962 102 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 GCLMP48507 274 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 DHPSP49366 369 aaPredicted RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 KLK7P49862 253 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 ZNF165P49910 485 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 ARPP19P56211 112 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 TNK2Q07912 1038 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 PSMD5Q16401 504 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 SNRNP35Q16560 246 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 MIIPQ5JXC2 388 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 TTC39BQ5VTQ0 682 aaPredicted RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 FAM171A1Q5VUB5 890 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 CDKAL1Q5VV42 579 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 NAIF1Q69YI7 327 aaPredicted RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 NXPE4Q6UWF7 544 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 ACAD11Q709F0 780 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 FILIP1Q7Z7B0 1213 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 GPD1LQ8N335 351 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 CSGALNACT2Q8N6G5 542 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 C3orf58Q8NDZ4 430 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 ENOX1Q8TC92 643 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 CSGALNACT1Q8TDX6 532 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 PARD3BQ8TEW8 1205 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 DNASE1L2Q92874 299 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 CCDC47Q96A33 483 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 PGBD4Q96DM1 585 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 FAM46AQ96IP4 442 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 ZC3H10Q96K80 434 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 ACAP3Q96P50 834 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 LRRC3BQ96PB8 259 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 PPP1R10Q96QC0 940 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 COLEC11Q9BWP8 271 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 GTPBP2Q9BX10 602 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 TPSD1Q9BZJ3 242 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 TSPY26PQ9H489 355 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 MMRN2Q9H8L6 949 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 RPF1Q9H9Y2 349 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 FBRSL1Q9HCM7 1045 aaKnown RBP6.57□□□□□ -1.36
UBFD1-204ENST00000565634 TMEM74BQ9NUR3 256 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 INTS13Q9NVM9 706 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 FNIP2Q9P278 1114 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 TUBGCP4Q9UGJ1 667 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 SIX4Q9UIU6 781 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 KCNG1Q9UIX4 513 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 SLC8A2Q9UPR5 921 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 EXOC7Q9UPT5 735 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 NFE2L3Q9Y4A8 694 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 PCDHGA5Q9Y5G8 931 aa6.57□□□□□ -1.36
UBFD1-204ENST00000565634 ATXN2Q99700 1313 aaKnown RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 WDR27A2RRH5 827 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 CASTOR2A6NHX0 329 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 ZNF233A6NK53 670 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 KIAA1324LA8MWY0 1029 aaPredicted RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 SPECC1L-ADORA2AF8WAN1 911 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 H0YCG3 227 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 I3L4J1 428 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 PSMA7O14818 248 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 HCRTO43612 131 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 ADAM11O75078 769 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 SMNDC1O75940 238 aaKnown RBP eCLIP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 STK10O94804 968 aaKnown RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 LETM1O95202 739 aaPredicted RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 HNRNPA1P09651 372 aaKnown RBP eCLIP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 DLATP10515 647 aaKnown RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 MYL4P12829 197 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 PTPN2P17706 415 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 ATF4P18848 351 aaPredicted RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 EPHA1P21709 976 aa6.56□□□□□ -1.36
UBFD1-204ENST00000565634 FKBP3Q00688 224 aaKnown RBP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 SRSF1Q07955 248 aaKnown RBP eCLIP6.56□□□□□ -1.36
UBFD1-204ENST00000565634 ALCAMQ13740 583 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms