RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 PSMA7O14818 248 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 VDRP11473 427 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 RGS7P49802 495 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 TRIP4Q15650 581 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-209ENST00000565511 TRIM61Q5EBN2 209 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 PEAR1Q5VY43 1037 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-209ENST00000565511 LYSMD4Q5XG99 296 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 NUDT18Q6ZVK8 323 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 FMNL3Q8IVF7 1028 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 SLC41A1Q8IVJ1 513 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 RBBP8NLQ8NC74 664 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-209ENST00000565511 DHTKD1Q96HY7 919 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-209ENST00000565511 CEP63Q96MT8 703 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 DCLK3Q9C098 648 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 EVLQ9UI08 416 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-209ENST00000565511 PILRBQ9UKJ0 227 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 CTNND2Q9UQB3 1225 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 ZNF510Q9Y2H8 683 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 STON1Q9Y6Q2 735 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 CACNA1EQ15878 2313 aa24.85■■□□□ 1.57
RAB40C-209ENST00000565511 BIN1O00499 593 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 MSI1O43347 362 aaKnown RBP24.84■■□□□ 1.57
RAB40C-209ENST00000565511 BRD2P25440 801 aaKnown RBP24.84■■□□□ 1.57
RAB40C-209ENST00000565511 IL12RB1P42701 662 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 RPL6Q02878 288 aaKnown RBP24.84■■□□□ 1.57
RAB40C-209ENST00000565511 MORC3Q14149 939 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 CCDC40Q4G0X9 1142 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 TMEM215Q68D42 235 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 TMEM270Q6UE05 265 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 SYT12Q8IV01 421 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 NELFBQ8WX92 580 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 SORCS1Q8WY21 1168 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 MRGPRX1Q96LB2 322 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 LRRC4Q9HBW1 653 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 TMEM9BQ9NQ34 198 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 HESX1Q9UBX0 185 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 STRIP2Q9ULQ0 834 aa24.84■■□□□ 1.57
RAB40C-209ENST00000565511 GFRA2O00451 464 aa24.83■■□□□ 1.57
RAB40C-209ENST00000565511 TBXAS1P24557 533 aaPredicted RBP24.83■■□□□ 1.57
RAB40C-209ENST00000565511 STX17P56962 302 aa24.83■■□□□ 1.57
RAB40C-209ENST00000565511 BSPRYQ5W0U4 402 aa24.83■■□□□ 1.57
RAB40C-209ENST00000565511 LCLAT1Q6UWP7 414 aa24.83■■□□□ 1.57
RAB40C-209ENST00000565511 ELOA2Q8IYF1 753 aaPredicted RBP24.83■■□□□ 1.57
RAB40C-209ENST00000565511 CPXM2Q8N436 756 aa24.83■■□□□ 1.57
RAB40C-209ENST00000565511 CLEC4CQ8WTT0 213 aa24.83■■□□□ 1.57
RAB40C-209ENST00000565511 PLD4Q96BZ4 506 aa24.83■■□□□ 1.57
RAB40C-209ENST00000565511 NT5C1BQ96P26 610 aa24.83■■□□□ 1.57
RAB40C-209ENST00000565511 METTL14Q9HCE5 456 aaKnown RBP24.83■■□□□ 1.57
RAB40C-209ENST00000565511 PCDHB4Q9Y5E5 795 aa24.83■■□□□ 1.57
RAB40C-209ENST00000565511 PMM2O15305 246 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 TSPAN3O60637 253 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 LCP1P13796 627 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 CHKAP35790 457 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 NOVA1P51513 510 aaKnown RBP24.82■■□□□ 1.56
RAB40C-209ENST00000565511 SGSHP51688 502 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 SLC8A3P57103 927 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 DAOAP59103 153 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 YWHAEP62258 255 aaKnown RBP24.82■■□□□ 1.56
RAB40C-209ENST00000565511 BYSLQ13895 437 aaKnown RBP24.82■■□□□ 1.56
RAB40C-209ENST00000565511 FUT11Q495W5 492 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 PMF1Q6P1K2 205 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 RRAGAQ7L523 313 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 PPM1KQ8N3J5 372 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 KCTD13Q8WZ19 329 aa24.82■■□□□ 1.56
RAB40C-209ENST00000565511 THAP10Q9P2Z0 257 aaPredicted RBP24.82■■□□□ 1.56
RAB40C-209ENST00000565511 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.82■■□□□ 1.56
RAB40C-209ENST00000565511 SETSIPP0DME0 302 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 ENGP17813 658 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 HOXD9P28356 352 aaPredicted RBP24.81■■□□□ 1.56
RAB40C-209ENST00000565511 MAPK8P45983 427 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 ZNF132P52740 706 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 STIM1Q13586 685 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 ENPP2Q13822 863 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 UAP1L1Q3KQV9 507 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 SPDYCQ5MJ68 293 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 SDE2Q6IQ49 451 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 KIAA1324Q6UXG2 1013 aaKnown RBP24.81■■□□□ 1.56
RAB40C-209ENST00000565511 SIX6OS1Q8N1H7 587 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 SLC35F5Q8WV83 523 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 KREMEN1Q96MU8 473 aa24.81■■□□□ 1.56
RAB40C-209ENST00000565511 IPO9Q96P70 1041 aaKnown RBP24.81■■□□□ 1.56
RAB40C-209ENST00000565511 HOOK1Q9UJC3 728 aaKnown RBP24.81■■□□□ 1.56
RAB40C-209ENST00000565511 AP5Z1O43299 807 aa24.8■■□□□ 1.56
RAB40C-209ENST00000565511 PAEPP09466 180 aa24.8■■□□□ 1.56
RAB40C-209ENST00000565511 PRKCHP24723 683 aa24.8■■□□□ 1.56
RAB40C-209ENST00000565511 ZNF33AQ06730 810 aa24.8■■□□□ 1.56
RAB40C-209ENST00000565511 SH3PXD2AQ5TCZ1 1133 aa24.8■■□□□ 1.56
RAB40C-209ENST00000565511 ANKS1BQ7Z6G8 1248 aa24.8■■□□□ 1.56
RAB40C-209ENST00000565511 TRIM59Q8IWR1 403 aa24.8■■□□□ 1.56
RAB40C-209ENST00000565511 GTPBP4Q9BZE4 634 aaKnown RBP24.8■■□□□ 1.56
RAB40C-209ENST00000565511 MKRN2Q9H000 416 aaKnown RBP24.8■■□□□ 1.56
RAB40C-209ENST00000565511 HBS1LQ9Y450 684 aaKnown RBP24.8■■□□□ 1.56
RAB40C-209ENST00000565511 NUMA1Q14980 2115 aa24.8■■□□□ 1.56
RAB40C-209ENST00000565511 FRYQ5TBA9 3013 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 M0QYV0 167 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 ZNF234Q14588 700 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 DAB2IPQ5VWQ8 1189 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 SLC23A3Q6PIS1 610 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 SLC36A4Q6YBV0 504 aa24.79■■□□□ 1.56
RAB40C-209ENST00000565511 SCML4Q8N228 414 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms