RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 KAT6AQ92794 2004 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 CCDC187A0A096LP49 1063 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 LOC105369274A0A096LPK9 316 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 LOC102723532A0A0G2JNH3 316 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 WDHD1O75717 1129 aaPredicted RBP5.32□□□□□ -1.56
LINC00560-201ENST00000564593 PDE8BO95263 885 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 AGR2O95994 175 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 TK1P04183 234 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 TMIGD3P0DMS9 266 aaPredicted RBP5.32□□□□□ -1.56
LINC00560-201ENST00000564593 FPR3P25089 353 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 IGHMBP2P38935 993 aaKnown RBP5.32□□□□□ -1.56
LINC00560-201ENST00000564593 CBFBQ13951 182 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 EFR3AQ14156 821 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 FAM110CQ1W6H9 321 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 AAK1Q2M2I8 961 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 HECTD2Q5U5R9 776 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 SFTPA1Q8IWL2 248 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 ULK2Q8IYT8 1036 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 OR4N4Q8N0Y3 316 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 PNISRQ8TF01 805 aaKnown RBP5.32□□□□□ -1.56
LINC00560-201ENST00000564593 SLC9A6Q92581 669 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 LARP4BQ92615 738 aaKnown RBP5.32□□□□□ -1.56
LINC00560-201ENST00000564593 PDLIM2Q96JY6 352 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 FAR2Q96K12 515 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 EIF2AK1Q9BQI3 630 aaKnown RBP5.32□□□□□ -1.56
LINC00560-201ENST00000564593 TWSG1Q9GZX9 223 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 CHODLQ9H9P2 273 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 USP29Q9HBJ7 922 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 KCNK9Q9NPC2 374 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 G6PC2Q9NQR9 355 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 VPS45Q9NRW7 570 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 FOXJ2Q9P0K8 574 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 PGAP2Q9UHJ9 254 aa5.32□□□□□ -1.56
LINC00560-201ENST00000564593 SLC38A8A6NNN8 435 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 M0QYT0 321 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 CNTFP26441 200 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 ITPKBP27987 946 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 PLA2G5P39877 138 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 RBM5P52756 815 aaKnown RBP eCLIP5.31□□□□□ -1.56
LINC00560-201ENST00000564593 HMGA2P52926 109 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 RNASELQ05823 741 aaKnown RBP5.31□□□□□ -1.56
LINC00560-201ENST00000564593 ABHD18Q0P651 414 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 CCDC15Q0P6D6 951 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 LMAN2Q12907 356 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 ZNF169Q14929 603 aaPredicted RBP5.31□□□□□ -1.56
LINC00560-201ENST00000564593 SMAD1Q15797 465 aaKnown RBP5.31□□□□□ -1.56
LINC00560-201ENST00000564593 AARS2Q5JTZ9 985 aaKnown RBP5.31□□□□□ -1.56
LINC00560-201ENST00000564593 LAIR1Q6GTX8 287 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 ACSM6Q6P461 480 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 KIRREL2Q6UWL6 708 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 SYT13Q7L8C5 426 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 ZNF627Q7L945 461 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 TMEM57Q8N5G2 664 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 NPIPB3Q92617 1050 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 COG8Q96MW5 612 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 BAG5Q9UL15 447 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 RAB21Q9UL25 225 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 LZTS1Q9Y250 596 aa5.31□□□□□ -1.56
LINC00560-201ENST00000564593 TMEM191CA6NGB0 347 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 GCOM1H8Y6P7 765 aaPredicted RBP5.3□□□□□ -1.56
LINC00560-201ENST00000564593 POLBP06746 335 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 COPB1P53618 953 aaKnown RBP5.3□□□□□ -1.56
LINC00560-201ENST00000564593 RBM6P78332 1123 aaKnown RBP5.3□□□□□ -1.56
LINC00560-201ENST00000564593 GPC5P78333 572 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 PDCLQ13371 301 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 FAM187BQ17R55 369 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 TBRG1Q3YBR2 411 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 FAM153CQ494X1 144 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 RNASE12Q5GAN4 147 aaKnown RBP5.3□□□□□ -1.56
LINC00560-201ENST00000564593 CRIP3Q6Q6R5 217 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 C16orf89Q6UX73 402 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 LRRTM4Q86VH4 590 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 C12orf76Q8N812 135 aaPredicted RBP5.3□□□□□ -1.56
LINC00560-201ENST00000564593 CEP70Q8NHQ1 597 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 NEU4Q8WWR8 484 aaPredicted RBP5.3□□□□□ -1.56
LINC00560-201ENST00000564593 ASB12Q8WXK4 309 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 THAP7Q9BT49 309 aaPredicted RBP5.3□□□□□ -1.56
LINC00560-201ENST00000564593 TFCP2L1Q9NZI6 479 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 PDP2Q9P2J9 529 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 ANAPC4Q9UJX5 808 aa5.3□□□□□ -1.56
LINC00560-201ENST00000564593 TRPC5Q9UL62 973 aaPredicted RBP5.3□□□□□ -1.56
LINC00560-201ENST00000564593 FNDC1Q4ZHG4 1894 aaPredicted RBP5.3□□□□□ -1.56
LINC00560-201ENST00000564593 NKX2-8O15522 239 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 PRAMEF2O60811 474 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 TFRCP02786 760 aaKnown RBP5.29□□□□□ -1.56
LINC00560-201ENST00000564593 GALNSP34059 522 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 FAM3BP58499 235 aaPredicted RBP5.29□□□□□ -1.56
LINC00560-201ENST00000564593 RPL15P61313 204 aaKnown RBP5.29□□□□□ -1.56
LINC00560-201ENST00000564593 RAE1P78406 368 aaKnown RBP5.29□□□□□ -1.56
LINC00560-201ENST00000564593 SLC12A1Q13621 1099 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 DGAT2L7PQ6IED9 249 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 NAPRTQ6XQN6 538 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 SLC29A4Q7RTT9 530 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 ZNF804AQ7Z570 1209 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 ANKS1BQ7Z6G8 1248 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 RASAL3Q86YV0 1011 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 SIMC1Q8NDZ2 872 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 OR52L2PQ8NGH6 319 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 TBC1D5Q92609 795 aa5.29□□□□□ -1.56
LINC00560-201ENST00000564593 CIPCQ9C0C6 399 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms