RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 NDRG1Q92597 394 aaKnown RBP17.62■□□□□ 0.41
HDGFL3-203ENST00000563404 TATDN2Q93075 761 aa17.62■□□□□ 0.41
HDGFL3-203ENST00000563404 TOE1Q96GM8 510 aaKnown RBP17.62■□□□□ 0.41
HDGFL3-203ENST00000563404 TMEM176AQ96HP8 235 aa17.62■□□□□ 0.41
HDGFL3-203ENST00000563404 WSB2Q9NYS7 404 aaPredicted RBP17.62■□□□□ 0.41
HDGFL3-203ENST00000563404 USP36Q9P275 1121 aaKnown RBP17.62■□□□□ 0.41
HDGFL3-203ENST00000563404 MSRB2Q9Y3D2 182 aa17.62■□□□□ 0.41
HDGFL3-203ENST00000563404 LAMA5O15230 3695 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 TMEM8BA6NDV4 472 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 TULP2O00295 520 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 RPL13P26373 211 aaKnown RBP17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 CD6P30203 668 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 GTF2H1P32780 548 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 CHKAP35790 457 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 PLEKHG6Q3KR16 790 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 ARHGAP17Q68EM7 881 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 KRBA2Q6ZNG9 492 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 DENND1CQ8IV53 801 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 SMYD4Q8IYR2 804 aaPredicted RBP17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 SORCS1Q8WY21 1168 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 CDK5RAP1Q96SZ6 601 aaKnown RBP17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 UBXN6Q9BZV1 441 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 PRDM16Q9HAZ2 1276 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 ITM2CQ9NQX7 267 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 MARCH2Q9P0N8 246 aa17.61■□□□□ 0.41
HDGFL3-203ENST00000563404 FAM208BQ5VWN6 2430 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 FREM2Q5SZK8 3169 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 SLC12A8A0AV02 714 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 SRRM3A6NNA2 597 aaPredicted RBP17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 SH3BP5O60239 455 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 SYPP08247 313 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 MXI1P50539 228 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 COPAP53621 1224 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 YWHAGP61981 247 aaKnown RBP eCLIP17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 STARD3Q14849 445 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 FAM217AQ8IXS0 508 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 CPXM2Q8N436 756 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 CHCHD4Q8N4Q1 142 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 ANKRD52Q8NB46 1076 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 CCDC150Q8NCX0 1101 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 FBXL13Q8NEE6 735 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 ZCCHC14Q8WYQ9 949 aaKnown RBP17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 DNASE2BQ8WZ79 361 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 FOXJ1Q92949 421 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 CCDC47Q96A33 483 aaKnown RBP17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 GPR174Q9BXC1 333 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 DCLK3Q9C098 648 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 FAM124BQ9H5Z6 455 aaPredicted RBP17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 RAB20Q9NX57 234 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 ELOVL2Q9NXB9 296 aa17.6■□□□□ 0.41
HDGFL3-203ENST00000563404 ZFYVE26Q68DK2 2539 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 FAM221BA6H8Z2 402 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 NCAM1P13591 858 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 PRKCHP24723 683 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 TPMTP51580 245 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 TKTL1P51854 596 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 KRT85P78386 507 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 GRIK2Q13002 908 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 ZNF234Q14588 700 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 EDRF1Q3B7T1 1238 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 CBWD6Q4V339 395 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 CBWD3Q5JTY5 395 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 WDR45BQ5MNZ6 344 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 CBWD5Q5RIA9 395 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 SYCP2LQ5T4T6 812 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 PM20D1Q6GTS8 502 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 ANKS1BQ7Z6G8 1248 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 RAB44Q7Z6P3 723 aaPredicted RBP17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 TMPRSS6Q8IU80 811 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 FAXDC2Q96IV6 333 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 ULBP1Q9BZM6 244 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 SUSD2Q9UGT4 822 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 PKD1L2Q7Z442 2459 aa17.59■□□□□ 0.41
HDGFL3-203ENST00000563404 NPC1O15118 1278 aa17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 ZBED1O96006 694 aa17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 ZNF132P52740 706 aa17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 BNC1Q01954 994 aa17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 TRIP4Q15650 581 aaPredicted RBP17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 GOLGA7BQ2TAP0 167 aa17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 RSRC2Q7L4I2 434 aaKnown RBP17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 ARHGAP18Q8N392 663 aa17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 ZCCHC9Q8N567 271 aaKnown RBP17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 SIPA1Q96FS4 1042 aa17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 IL21RQ9HBE5 538 aa17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 DSPP15924 2871 aaKnown RBP17.58■□□□□ 0.4
HDGFL3-203ENST00000563404 CKAP5Q14008 2032 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 A0A1W2PQ27 194 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 A0A1W2PQ64 194 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 MEI4A8MW99 385 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 H0Y626 953 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 TAF4O00268 1085 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 ZNF202O95125 648 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 TRIM16O95361 564 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 IGLV3-19P01714 112 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 CAPNS1P04632 268 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 GNSP15586 552 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 HOXD9P28356 352 aaPredicted RBP17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 PDE4CQ08493 712 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 SLC14A1Q13336 389 aa17.57■□□□□ 0.4
HDGFL3-203ENST00000563404 TRIP6Q15654 476 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms