RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RILPL2Q969X0 211 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 VPS50Q96JG6 964 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 FAM167BQ9BTA0 163 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 KATNAL1Q9BW62 490 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 TP63Q9H3D4 680 aaPredicted RBP3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 GAR1Q9NY12 217 aaKnown RBP3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 CCNL1Q9UK58 526 aaPredicted RBP3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 ADAM21Q9UKJ8 722 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 SCAF8Q9UPN6 1271 aaKnown RBP3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 ARHGEF17Q96PE2 2063 aaPredicted RBP3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 GXYLT2A0PJZ3 443 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 WIPF3A6NGB9 483 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 RRN3P2A6NIE6 340 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 H7C1Q1 480 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 J3KTA2 159 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 EIF3FO00303 357 aaPredicted RBP3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 CES2O00748 559 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 ASNA1O43681 348 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 ANXA6P08133 673 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 SRGAP2BP0DMP2 458 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 VEGFAP15692 232 aaPredicted RBP3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 PBX1P40424 430 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 POLE2P56282 527 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 CYP4F2P78329 520 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 IRX6P78412 446 aaPredicted RBP3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 DEUP1Q05D60 604 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 LMAN2Q12907 356 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 DNASE1L3Q13609 305 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 TAF12Q16514 161 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 RNASE12Q5GAN4 147 aaKnown RBP3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 TMEM63BQ5T3F8 832 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 KIAA1614Q5VZ46 1190 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 TANGO2Q6ICL3 276 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 SULT6B1Q6IMI4 303 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 LIN54Q6MZP7 749 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 SLC29A4Q7RTT9 530 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 LINC01465Q8N7H1 131 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 NGDNQ8NEJ9 315 aaKnown RBP3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 OVCA2Q8WZ82 227 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 GCC1Q96CN9 775 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 REPS1Q96D71 796 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 EDC3Q96F86 508 aaKnown RBP3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 SNX18Q96RF0 628 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 PRPF18Q99633 342 aaKnown RBP3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 PAAF1Q9BRP4 392 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 SLC29A3Q9BZD2 475 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 EPS8L2Q9H6S3 715 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 FSCN3Q9NQT6 498 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 SNX15Q9NRS6 342 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 MGAT4CQ9UBM8 478 aa3.74□□□□□ -1.81
SHCBP1-202ENST00000563219 AOX1Q06278 1338 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 HMX3A6NHT5 357 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 IPO5O00410 1097 aaKnown RBP3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 CTIFO43310 598 aaKnown RBP3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 TAF5LO75529 589 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 POLBP06746 335 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 HNRNPCP07910 306 aaKnown RBP eCLIP3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 DHRS4L1P0CG22 281 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 TNFAIP3P21580 790 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 FPR3P25089 353 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 ALDH18A1P54886 795 aaKnown RBP3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 PPFIA1Q13136 1202 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 CSHL1Q14406 222 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 TRIM60Q495X7 471 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 TMEM196Q5HYL7 178 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 EPHA10Q5JZY3 1008 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 JAKMIP3Q5VZ66 844 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 MSANTD2Q6P1R3 559 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 KIRREL2Q6UWL6 708 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 PIK3AP1Q6ZUJ8 805 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 C1QL2Q7Z5L3 287 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 BCDIN3DQ7Z5W3 292 aaKnown RBP3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 TTC30AQ86WT1 665 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 NRSN1Q8IZ57 195 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 TEX19Q8NA77 164 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 STT3BQ8TCJ2 826 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 HASPINQ8TF76 798 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 SCARB1Q8WTV0 552 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 TRAPPC12Q8WVT3 735 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 SMG7Q92540 1137 aaKnown RBP3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 DPF1Q92782 380 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 UBXN10Q96LJ8 280 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 C1QTNF7Q9BXJ2 289 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 MLXIPQ9HAP2 919 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 KCNK9Q9NPC2 374 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 TERF2IPQ9NYB0 399 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 RNF7Q9UBF6 113 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 LPAR3Q9UBY5 353 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 HERC5Q9UII4 1024 aaKnown RBP3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 ANAPC4Q9UJX5 808 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 ASAP1Q9ULH1 1129 aa3.73□□□□□ -1.81
SHCBP1-202ENST00000563219 PNMA6EA0A0J9YXQ4 647 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 MANSC4A6NHS7 340 aaPredicted RBP3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 TARM1B6A8C7 271 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 H3BNC9 293 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 FCHO1O14526 889 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 DNPH1O43598 174 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 JTBO76095 146 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 PDE8BO95263 885 aa3.72□□□□□ -1.81
SHCBP1-202ENST00000563219 PRKCGP05129 697 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms