RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 FGF19O95750 216 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 IGLV3-25P01717 112 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 APOEP02649 317 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 RHOXF2BP0C7M4 288 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 HMGA1P17096 107 aaKnown RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 COILP38432 576 aaPredicted RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 HCAR3P49019 387 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 FNTAP49354 379 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 TUBP50607 506 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 ARSEP51690 589 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 ATXN1P54253 815 aaKnown RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 TBX4P57082 545 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 PITX1P78337 314 aaPredicted RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 SCAPQ12770 1279 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 EFEMP1Q12805 493 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 KLF1Q13351 362 aaPredicted RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 DHX34Q14147 1143 aaKnown RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 DPYSL3Q14195 570 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 LLGL1Q15334 1064 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 ANKRD20A8PQ5CZ79 823 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 ZC3H12AQ5D1E8 599 aaKnown RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 PPM1LQ5SGD2 360 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 FAM109BQ6ICB4 259 aaPredicted RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 CCDC137Q6PK04 289 aaKnown RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 PDZD4Q76G19 769 aaPredicted RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 BZW1Q7L1Q6 419 aaKnown RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 TAC4Q86UU9 113 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 CCDC105Q8IYK2 499 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 CCDC185Q8N715 623 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 PRELID2Q8N945 189 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 C12orf50Q8NA57 414 aaPredicted RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 ATL2Q8NHH9 583 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 RUBCNQ92622 972 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 P3H4Q92791 437 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 CASP10Q92851 521 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 HAPLN3Q96S86 360 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 EPAS1Q99814 870 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 RHOXF2Q9BQY4 288 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 LRRC1Q9BTT6 524 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 NACA2Q9H009 215 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 TKTL2Q9H0I9 626 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 DDX47Q9H0S4 455 aaKnown RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 LMAN2LQ9H0V9 348 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 OSBPL2Q9H1P3 480 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 LRRC19Q9H756 370 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 WDR6Q9NNW5 1121 aaKnown RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 GPATCH2LQ9NWQ4 482 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.69□□□□□ -0.7
USP3-219ENST00000561326 PCYOX1Q9UHG3 505 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 SFMBT1Q9UHJ3 866 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 RASAL2Q9UJF2 1139 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 DNMT3LQ9UJW3 386 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 V9GYY5 206 aaPredicted RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 COL4A4P53420 1690 aaPredicted RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 SHROOM3Q8TF72 1996 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 TCRBV7S2A1N4TA0A589 114 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 ZNF840PA6NDX5 716 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 FAM187AA6NFU0 413 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 HIDE1A8MVS5 230 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 APOL1O14791 398 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 TLR5O60602 858 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 GAS8O95995 478 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 C8AP07357 584 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 CD48P09326 243 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 TGM2P21980 687 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 DNAJB1P25685 340 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 HTR7P34969 479 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 NR2C2P49116 596 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 COG7P83436 770 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 DR1Q01658 176 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 RING1Q06587 406 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 MMRN1Q13201 1228 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 EIF4EBP2Q13542 120 aaPredicted RBP10.68□□□□□ -0.7
USP3-219ENST00000561326 TRIP4Q15650 581 aaPredicted RBP10.68□□□□□ -0.7
USP3-219ENST00000561326 OTUD1Q5VV17 481 aaPredicted RBP10.68□□□□□ -0.7
USP3-219ENST00000561326 PPP2R2DQ66LE6 453 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 DRICH1Q6PGQ1 229 aaPredicted RBP10.68□□□□□ -0.7
USP3-219ENST00000561326 KLHDC10Q6PID8 442 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 UNC45BQ8IWX7 931 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 IFT20Q8IY31 132 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 ATP6V0D2Q8N8Y2 350 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 PPP2R3CQ969Q6 453 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 GCNAQ96QF7 691 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 ADAM33Q9BZ11 813 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 DCLK3Q9C098 648 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 RAB17Q9H0T7 212 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 ARGLU1Q9NWB6 273 aaPredicted RBP10.68□□□□□ -0.7
USP3-219ENST00000561326 OSER1Q9NX31 292 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 ARHGEF38Q9NXL2 777 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 DONSONQ9NYP3 566 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 CALCOCO1Q9P1Z2 691 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 OR12D3Q9UGF7 316 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 NUDT5Q9UKK9 219 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 DRG1Q9Y295 367 aaKnown RBP10.68□□□□□ -0.7
USP3-219ENST00000561326 YBX2Q9Y2T7 364 aaKnown RBP10.68□□□□□ -0.7
USP3-219ENST00000561326 UTP11Q9Y3A2 253 aaKnown RBP10.68□□□□□ -0.7
USP3-219ENST00000561326 HBS1LQ9Y450 684 aaKnown RBP10.68□□□□□ -0.7
USP3-219ENST00000561326 NR2E1Q9Y466 385 aa10.68□□□□□ -0.7
USP3-219ENST00000561326 MYO18AQ92614 2054 aaKnown RBP10.68□□□□□ -0.7
USP3-219ENST00000561326 PDE4DIPQ5VU43 2346 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms