RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 FBXO43Q4G163 708 aa20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 DEFB106AQ8N104 65 aa20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 BAP1Q92560 729 aa20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 C18orf8Q96DM3 657 aa20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 FAM122AQ96E09 287 aa20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 PRMT8Q9NR22 394 aaPredicted RBP20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 SEPT11Q9NVA2 429 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 ASNSD1Q9NWL6 643 aa20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 C2orf42Q9NWW7 574 aa20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 MARK1Q9P0L2 795 aa20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 WDR35Q9P2L0 1181 aa20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 DEC1Q9P2X7 70 aa20.75■□□□□ 0.91
TSPAN3-210ENST00000561277 KIAA1549LQ6ZVL6 1849 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 ATG2BQ96BY7 2078 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 KAT7O95251 611 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 IGLV3-27P01718 113 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 GLI1P08151 1106 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 CXCL12P48061 93 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 PITX1P78337 314 aaPredicted RBP20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 NUGGCQ68CJ6 796 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 SLC26A9Q7LBE3 791 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 MSANTD4Q8NCY6 345 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 RPLP0P6Q8NHW5 317 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 P2RY11Q96G91 374 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 SLC2A13Q96QE2 648 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 XPO6Q96QU8 1125 aaKnown RBP20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 FAM204AQ9H8W3 233 aa20.74■□□□□ 0.91
TSPAN3-210ENST00000561277 SYNJ2BP-COX16A0A087WUM0 186 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 ANTXRLA6NF34 631 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 LRRC53A6NM62 1247 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 K7EQS6 105 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 CACNG3O60359 315 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 TRUB2O95900 331 aaKnown RBP20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 CYP1A1P04798 512 aaPredicted RBP20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 CYBBP04839 570 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 FERP16591 822 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 RNASE9P60153 205 aaKnown RBP20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 RING1Q06587 406 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 FAM102AQ5T9C2 384 aaPredicted RBP20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 ZDHHC17Q8IUH5 632 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 UNC45BQ8IWX7 931 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 RNF214Q8ND24 703 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 FCRL2Q96LA5 508 aaPredicted RBP20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 PHOX2BQ99453 314 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 COX16Q9P0S2 106 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 IFNKQ9P0W0 207 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 FBXO4Q9UKT5 387 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 TLR6Q9Y2C9 796 aa20.73■□□□□ 0.91
TSPAN3-210ENST00000561277 GOLGA8SH3BPF8 625 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 IRAK2O43187 625 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 TSPAN3O60637 253 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 DAB1O75553 588 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 MOCS2O96007 188 aaPredicted RBP20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 GRIA2P42262 883 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 GABRB2P47870 512 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 SLC11A2P49281 568 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 CDK17Q00537 523 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 NNTQ13423 1086 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 C2orf27AQ580R0 203 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 FYB2Q5VWT5 728 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 GRAMD4Q6IC98 578 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 TRIM72Q6ZMU5 477 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 MMS22LQ6ZRQ5 1243 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 XYLT1Q86Y38 959 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 FAM217AQ8IXS0 508 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 PHTF2Q8N3S3 785 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 CPXM2Q8N436 756 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 SLC30A5Q8TAD4 765 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 TBC1D3BA6NDS4 549 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 LATS1O95835 1130 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 PENKP01210 267 aaPredicted RBP20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 CCDC172P0C7W6 258 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 PLA2G5P39877 138 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 PPP2R5DQ14738 602 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 TERB1Q8NA31 727 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 DDI1Q8WTU0 396 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 PCDHB18PQ96TA0 734 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 C11orf70Q9BRQ4 267 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 POLR3BQ9NW08 1133 aaPredicted RBP20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 DDIT4Q9NX09 232 aa20.72■□□□□ 0.91
TSPAN3-210ENST00000561277 GOLGA6L7A0A1B0GV03 622 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 ATG13O75143 517 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 IGLV3-25P01717 112 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 APOEP02649 317 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 DGKGP49619 791 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 PREPLQ4J6C6 727 aaPredicted RBP20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 C10orf76Q5T2E6 689 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 ADGRF1Q5T601 910 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 RFWD3Q6PCD5 774 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 MAMSTRQ6ZN01 415 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 PHLDB2Q86SQ0 1253 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 ZNF397Q8NF99 534 aaPredicted RBP20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 SLC39A13Q96H72 371 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 AGPAT1Q99943 283 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 TTYH3Q9C0H2 523 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 ZDHHC4Q9NPG8 344 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 STOML2Q9UJZ1 356 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 MYO6Q9UM54 1294 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 R4GN57 208 aa20.71■□□□□ 0.91
TSPAN3-210ENST00000561277 DMDP11532 3685 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms