RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 HFE2Q6ZVN8 426 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 H2AFVQ71UI9 128 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 ADGRG2Q8IZP9 1017 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 CCDC112Q8NEF3 446 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 RSAD2Q8WXG1 361 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 NDRG1Q92597 394 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 KHSRPQ92945 711 aaKnown RBP eCLIP12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 BTN2A3PQ96KV6 586 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 OSBPL6Q9BZF3 934 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 PLA2G2FQ9BZM2 168 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 RETREG1Q9H6L5 497 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 FAM204AQ9H8W3 233 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 CD320Q9NPF0 282 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 UVRAGQ9P2Y5 699 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 MUTYHQ9UIF7 546 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 MIA3Q5JRA6 1907 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 COL4A2P08572 1712 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 C2CD4BA6NLJ0 364 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 EIF3CLB5ME19 914 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 M0QYT0 321 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 ARNTLO00327 626 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 GPD1P21695 349 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 CORO1AP31146 461 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 MAGEA9P43362 315 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 ZNF143P52747 638 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 RNASE9P60153 205 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 GAD2Q05329 585 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 EIF4EBP2Q13542 120 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 GRM2Q14416 872 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 EML3Q32P44 896 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 SLC44A4Q53GD3 710 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 MPP7Q5T2T1 576 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 SYPL2Q5VXT5 272 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 Q6ZNB5 142 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 TRIM67Q6ZTA4 783 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 FAM217AQ8IXS0 508 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 RNF34Q969K3 372 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 ZNF653Q96CK0 615 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 RSPRY1Q96DX4 576 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 SLC39A13Q96H72 371 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 NECAB3Q96P71 396 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 EIF3CQ99613 913 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 CNPY3Q9BT09 278 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 RPP25Q9BUL9 199 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 C1QTNF1Q9BXJ1 281 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 COL25A1Q9BXS0 654 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 SMG9Q9H0W8 520 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 WDCPQ9H6R7 721 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 METTL5Q9NRN9 209 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 DDIT4Q9NX09 232 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 MARK1Q9P0L2 795 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 TJP2Q9UDY2 1190 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 CNOT8Q9UFF9 292 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 SFMBT1Q9UHJ3 866 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 NUDT5Q9UKK9 219 aa12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 SPTBN5Q9NRC6 3674 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-215ENST00000560207 MYOFQ9NZM1 2061 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 TCRBV5S1A1TA0A578 114 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 TMCO5BA8MYB1 307 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 RNF8O76064 485 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 LCA5LO95447 670 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 PLEKP08567 350 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 TMEM253P0C7T8 217 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 RRM1P23921 792 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 RDXP35241 583 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 CXCR3P49682 368 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 SULT1E1P49888 294 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 STARD6P59095 220 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 ZXDBP98169 803 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 DEUP1Q05D60 604 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 MAMLD1Q13495 774 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 GSE1Q14687 1217 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 TAF5Q15542 800 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 MLF2Q15773 248 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 MPPE1Q53F39 396 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 PPP1R15BQ5SWA1 713 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 TTC39BQ5VTQ0 682 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 ZNF852Q6ZMS4 543 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 BMP8AQ7Z5Y6 402 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 TAC4Q86UU9 113 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 CCDC117Q8IWD4 279 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 RHOT2Q8IXI1 618 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 UBE2Q2Q8WVN8 375 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 CENPIQ92674 756 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 C1orf74Q96LT6 269 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 LRRC3BQ96PB8 259 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 XPO6Q96QU8 1125 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 BAG1Q99933 345 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 IER2Q9BTL4 223 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 SLC2A11Q9BYW1 496 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 ECT2Q9H8V3 914 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 ARHGEF3Q9NR81 526 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 SPHK2Q9NRA0 654 aa12.53□□□□□ -0.4
RABGGTA-215ENST00000560207 TMEM191CA6NGB0 347 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 KCNU1A8MYU2 1149 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 MDM4O15151 490 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 HOXC11O43248 304 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 ACSL4O60488 711 aa12.52□□□□□ -0.41
RABGGTA-215ENST00000560207 GREM1O60565 184 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms