RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 LRG1P02750 347 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 CLK3P49761 638 aaKnown RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 ATP2C1P98194 919 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 CBWD2Q8IUF1 395 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 DAW1Q8N136 415 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 ZC3H10Q96K80 434 aaKnown RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 TEKT5Q96M29 485 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 REEP1Q9H902 201 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 DBNDD1Q9H9R9 158 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 RSL24D1Q9UHA3 163 aaKnown RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 USP21Q9UK80 565 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 TMEM5Q9Y2B1 443 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 SDR42E2A6NKP2 422 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 LSM1O15116 133 aaKnown RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 SKIV2L2P42285 1042 aaKnown RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 RNF44Q7L0R7 432 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 DGCR6LQ9BY27 220 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 LRCH1Q9Y2L9 728 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 LYVE1Q9Y5Y7 322 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 MYBPC2Q14324 1141 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 FICDQ9BVA6 458 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 WHRNQ9P202 907 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 VPS51Q9UID3 782 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 CTTNBP2Q8WZ74 1663 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 A0A1W2PQ72 361 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 SLC15A2Q16348 729 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 WDR72Q3MJ13 1102 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 ZNF589Q86UQ0 364 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 DEFB107AQ8IZN7 70 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 DHRSXQ8N5I4 330 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 VPS35Q96QK1 796 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 PNPLA8Q9NP80 782 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 NDUFAF1Q9Y375 327 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 ITIH6Q6UXX5 1313 aa14.19□□□□□ -0.14
CSPG4P12-202ENST00000559989 OR14I1A6ND48 311 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 LDOC1O95751 146 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 MYBPC1Q00872 1141 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 PMPCBO75439 489 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 COILP38432 576 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 GSSP48637 474 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 NAB2Q15742 525 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 PRDM8Q9NQV8 689 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 METTL5Q9NRN9 209 aaKnown RBP14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 SNX6Q9UNH7 406 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 PDXKO00764 312 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 MDM4O15151 490 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 MTTPP55157 894 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 OVGP1Q12889 678 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 RAB11FIP2Q7L804 512 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 TOR4AQ9NXH8 423 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 CROTQ9UKG9 612 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 DNAJC16Q9Y2G8 782 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 TMCC2O75069 709 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 EPN2O95208 641 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 PDGFRBP09619 1106 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 VPS72Q15906 364 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 KBTBD8Q8NFY9 601 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 OR2W6PQ8NHA6 318 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 DYNLL2Q96FJ2 89 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 RPRD1AQ96P16 312 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 TEX13BQ9BXU2 312 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 UNKQ9C0B0 810 aaKnown RBP14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 CHST12Q9NRB3 414 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 RPS6KL1Q9Y6S9 549 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 A0A088AWK7 358 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 METTL21EPA6NDL7 271 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 UBDO15205 165 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 SLC25A12O75746 678 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 ZNF10P21506 573 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 IL12AP29459 219 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 AQP5P55064 265 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 SLC34A1Q06495 639 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 ITFG1Q8TB96 612 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 KLF6Q99612 283 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 JMJD4Q9H9V9 463 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 PDGFCQ9NRA1 345 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 NUDT5Q9UKK9 219 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 ERBB4Q15303 1308 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 PSIP1O75475 530 aaKnown RBP14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 SEC24AO95486 1093 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 KCNB1Q14721 858 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 MFSD7Q6UXD7 560 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 RASGRP2Q7LDG7 609 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 FEZF2Q8TBJ5 459 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 PLEKHG4BQ96PX9 1271 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 ENTPD4Q9Y227 616 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 SASH1O94885 1247 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 PTPN3P26045 913 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 SLC1A6P48664 564 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 USP11P51784 963 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 COPZ1P61923 177 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 SMTNL2Q2TAL5 461 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 JPH1Q9HDC5 661 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 FAM49BQ9NUQ9 324 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 ABI2Q9NYB9 513 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 PTGFRNQ9P2B2 879 aa14.18□□□□□ -0.14
CSPG4P12-202ENST00000559989 AFF2P51816 1311 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 H7C1W4 665 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 WRBO00258 174 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms