RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 RB1P06400 928 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 RBP3P10745 1247 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 ATP5DP30049 168 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 HDAC4P56524 1084 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 ROR1Q01973 937 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 MMRN1Q13201 1228 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 KYNUQ16719 465 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 RAB6CQ53S08 254 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 STRADAQ7RTN6 431 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 TAS1R1Q7RTX1 841 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 RNF168Q8IYW5 571 aaPredicted RBP18.47■□□□□ 0.55
SNX1-208ENST00000559844 CLEC4CQ8WTT0 213 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 CCDC77Q9BR77 488 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 MED10Q9BTT4 135 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 RAB6CQ9H0N0 254 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 LRRC4CQ9HCJ2 640 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 PCDH18Q9HCL0 1135 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 CALCOCO1Q9P1Z2 691 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 SLC12A6Q9UHW9 1150 aa18.47■□□□□ 0.55
SNX1-208ENST00000559844 ARHGEF37A1IGU5 675 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 APOL1O14791 398 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 DAB1O75553 588 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 TCEA3O75764 348 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 SOD2P04179 222 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 ABHD2P08910 425 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 PECAM1P16284 738 aaPredicted RBP18.46■□□□□ 0.55
SNX1-208ENST00000559844 MAGEA4P43358 317 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 GUCY1A3Q02108 690 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 ANKRD20A8PQ5CZ79 823 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 UBAP2Q5T6F2 1119 aaKnown RBP18.46■□□□□ 0.55
SNX1-208ENST00000559844 PPIL6Q8IXY8 311 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 VPS52Q8N1B4 723 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 EPS8L3Q8TE67 593 aaKnown RBP18.46■□□□□ 0.55
SNX1-208ENST00000559844 SYT15Q9BQS2 421 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 LRRC4Q9HBW1 653 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 DNAJC17Q9NVM6 304 aaKnown RBP18.46■□□□□ 0.55
SNX1-208ENST00000559844 CDH9Q9ULB4 789 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 COL4A4P53420 1690 aaPredicted RBP18.46■□□□□ 0.55
SNX1-208ENST00000559844 SYN3O14994 580 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 ATP2C2O75185 946 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 FAM200BP0CF97 657 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 FGFR3P22607 806 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 ACAT1P24752 427 aaKnown RBP18.46■□□□□ 0.55
SNX1-208ENST00000559844 LSP1P33241 339 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 MATKP42679 507 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 AUHQ13825 339 aaKnown RBP18.46■□□□□ 0.55
SNX1-208ENST00000559844 USP41Q3LFD5 358 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 TNFAIP8L3Q5GJ75 292 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 MDH1BQ5I0G3 518 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 TTC19Q6DKK2 380 aaPredicted RBP18.46■□□□□ 0.55
SNX1-208ENST00000559844 KIAA1841Q6NSI8 718 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 CENPUQ71F23 418 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 FAF2Q96CS3 445 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 PWWP2AQ96N64 755 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 TTPALQ9BTX7 342 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 DSEQ9UL01 958 aa18.46■□□□□ 0.55
SNX1-208ENST00000559844 CDH23Q9H251 3354 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 MYO7AQ13402 2215 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 CFAP69A5D8W1 941 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 SMIM23A6NLE4 172 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 CSPG5O95196 566 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 ZFXP17010 805 aaPredicted RBP18.45■□□□□ 0.54
SNX1-208ENST00000559844 TYMPP19971 482 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 MRPS5P82675 430 aaKnown RBP18.45■□□□□ 0.54
SNX1-208ENST00000559844 ADIGQ0VDE8 80 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 STAT4Q14765 748 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 DPYSL2Q16555 572 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 ZC3H12AQ5D1E8 599 aaKnown RBP18.45■□□□□ 0.54
SNX1-208ENST00000559844 RTP2Q5QGT7 225 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 SLC9A4Q6AI14 798 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 DARS2Q6PI48 645 aaKnown RBP18.45■□□□□ 0.54
SNX1-208ENST00000559844 PAQR9Q6ZVX9 377 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 TAOK1Q7L7X3 1001 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 METTL23Q86XA0 190 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 SPPL3Q8TCT6 385 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 PRCCQ92733 491 aaPredicted RBP18.45■□□□□ 0.54
SNX1-208ENST00000559844 HERC2P3Q9BVR0 1158 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 SAYSD1Q9NPB0 183 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 FARP1Q9Y4F1 1045 aaPredicted RBP18.45■□□□□ 0.54
SNX1-208ENST00000559844 ATG2AQ2TAZ0 1938 aa18.45■□□□□ 0.54
SNX1-208ENST00000559844 H3BNC9 293 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 FBXO21O94952 628 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 CYP11A1P05108 521 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 IL4RP24394 825 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 PCSK1P29120 753 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 RPL22P35268 128 aaKnown RBP18.44■□□□□ 0.54
SNX1-208ENST00000559844 GDF10P55107 478 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 HNRNPH2P55795 449 aaKnown RBP18.44■□□□□ 0.54
SNX1-208ENST00000559844 YWHAHQ04917 246 aaPredicted RBP18.44■□□□□ 0.54
SNX1-208ENST00000559844 GPM6BQ13491 265 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 VARS2Q5ST30 1063 aaKnown RBP18.44■□□□□ 0.54
SNX1-208ENST00000559844 OVOS1Q6IE37 1185 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 CLEC20AQ6ZU45 233 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 UNC45BQ8IWX7 931 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 SIX6OS1Q8N1H7 587 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 BCAS4Q8TDM0 211 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 POF1BQ8WVV4 589 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 EPN3Q9H201 632 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 GPATCH2LQ9NWQ4 482 aa18.44■□□□□ 0.54
SNX1-208ENST00000559844 STK39Q9UEW8 545 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms