RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CACNA1SQ13698 1873 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 RHOCP08134 193 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 RPL17P18621 184 aaKnown RBP11□□□□□ -0.65
CARMIL3-202ENST00000559694 NDUFV1P49821 464 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 TTMPQ5BVD1 217 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 FAXCQ5TGI0 409 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 CREG2Q8IUH2 290 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 TNS4Q8IZW8 715 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 NUP93Q8N1F7 819 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 SLC25A41Q8N5S1 370 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 UCMAQ8WVF2 138 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 MAML1Q92585 1016 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 MIEF2Q96C03 454 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 GRAMD1AQ96CP6 724 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 TMA16Q96EY4 203 aaKnown RBP11□□□□□ -0.65
CARMIL3-202ENST00000559694 CELF6Q96J87 481 aaKnown RBP11□□□□□ -0.65
CARMIL3-202ENST00000559694 CDK5RAP1Q96SZ6 601 aaKnown RBP11□□□□□ -0.65
CARMIL3-202ENST00000559694 L3MBTL1Q9Y468 752 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 ANGPTL3Q9Y5C1 460 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 UBA6A0AVT1 1052 aaPredicted RBP11□□□□□ -0.65
CARMIL3-202ENST00000559694 CBX4O00257 560 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 TRUB2O95900 331 aaKnown RBP11□□□□□ -0.65
CARMIL3-202ENST00000559694 CYP2F1P24903 491 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 ERFP50548 548 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 TUBP50607 506 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 FMO1Q01740 532 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 KRT33BQ14525 404 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 HIF1AQ16665 826 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 HECTD3Q5T447 861 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 PSRC1Q6PGN9 363 aaPredicted RBP11□□□□□ -0.65
CARMIL3-202ENST00000559694 SERINC5Q86VE9 423 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 ERP27Q96DN0 273 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 ABCC13Q9NSE7 274 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 MTSS1O43312 755 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 SPAG7O75391 227 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 HAUS5O94927 633 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 ATP6V1G2O95670 118 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 MIPP30301 263 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 NOS2P35228 1153 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 MEA1Q16626 185 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 ZC3H12AQ5D1E8 599 aaKnown RBP11□□□□□ -0.65
CARMIL3-202ENST00000559694 ERMARDQ5T6L9 678 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 RFX8Q6ZV50 586 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 ANKMY2Q8IV38 441 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 HIPK4Q8NE63 616 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 SPPL2BQ8TCT7 592 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 DTX3LQ8TDB6 740 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 TFB1MQ8WVM0 346 aaKnown RBP11□□□□□ -0.65
CARMIL3-202ENST00000559694 CRYGNQ8WXF5 182 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 DLGAP2Q9P1A6 1054 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 BCAP29Q9UHQ4 241 aa11□□□□□ -0.65
CARMIL3-202ENST00000559694 MYH6P13533 1939 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 ABHD14A-ACY1A0A1B0GW23 586 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 TMEM120BA0PK00 339 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 PRR23AA6NEV1 266 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 KRT37O76014 449 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 JCHAINP01591 159 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 CSF2RAP15509 400 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 NQO1P15559 274 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 GRAMD1BQ3KR37 738 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 HERC6Q8IVU3 1022 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 TKTL2Q9H0I9 626 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 PAK5Q9P286 719 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 A0A0A6YYK5 440 aaPredicted RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 F8W8V4 182 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 TPD52P55327 224 aaPredicted RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 COPS2P61201 443 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 OTUD4Q01804 1114 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 PREPLQ4J6C6 727 aaPredicted RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 WNT8BQ93098 351 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 ALKBH8Q96BT7 664 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 ERP44Q9BS26 406 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 KDM4CQ9H3R0 1056 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 TBC1D13Q9NVG8 400 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 VANGL2Q9ULK5 521 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 PLA2G4CQ9UP65 541 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 MYO5AQ9Y4I1 1855 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 S100BP04271 92 aaPredicted RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 PAPOLAP51003 745 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 MRPS35P82673 323 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 LPIN1Q14693 890 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 TPGS1Q6ZTW0 290 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 IRF2BP2Q7Z5L9 587 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 LGI2Q8N0V4 545 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 ACTL9Q8TC94 416 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 DNAJC9Q8WXX5 260 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 EMID1Q96A84 441 aaPredicted RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 CINPQ9BW66 212 aaPredicted RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 DUSP16Q9BY84 665 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 B3GNT5Q9BYG0 378 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 AGO3Q9H9G7 860 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 AVENQ9NQS1 362 aaPredicted RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 THG1LQ9NWX6 298 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 PPARGC1AQ9UBK2 798 aaKnown RBP10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 PCDHB8Q9UN66 801 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 MYH15Q9Y2K3 1946 aa10.99□□□□□ -0.65
CARMIL3-202ENST00000559694 hCG_2014768A0A024R1R8 64 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 RNF225M0QZC1 329 aaPredicted RBP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 CAND2O75155 1236 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 ASMTLO95671 621 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms