RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 GPR149Q86SP6 731 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 TEKT4Q8WW24 435 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 NTAN1Q96AB6 310 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 SLC22A12Q96S37 553 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 OSBPL9Q96SU4 736 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 PSMB7Q99436 277 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 WDCPQ9H6R7 721 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 DDX56Q9NY93 547 aaKnown RBP18.79■□□□□ 0.6
CLPX-203ENST00000558958 SAR1BQ9Y6B6 198 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 OBSL1O75147 1896 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 SLC12A8A0AV02 714 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 KCNK3O14649 394 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 IGLV3-27P01718 113 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 TCP1P17987 556 aaKnown RBP18.78■□□□□ 0.6
CLPX-203ENST00000558958 HDCP19113 662 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 DDX6P26196 483 aaKnown RBP eCLIP18.78■□□□□ 0.61e-7■□□□□ 8.9
CLPX-203ENST00000558958 CCR1P32246 355 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 ADRA1BP35368 520 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 KPNA1P52294 538 aaPredicted RBP18.78■□□□□ 0.6
CLPX-203ENST00000558958 AIF1P55008 147 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 TBX4P57082 545 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 BRMS1LQ5PSV4 323 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 DNTTIP2Q5QJE6 756 aaKnown RBP18.78■□□□□ 0.6
CLPX-203ENST00000558958 STXBP5Q5T5C0 1151 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 ERMARDQ5T6L9 678 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 DCAF12L1Q5VU92 463 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 PSTKQ8IV42 348 aaKnown RBP18.78■□□□□ 0.6
CLPX-203ENST00000558958 ARL14EPQ8N8R7 260 aaPredicted RBP18.78■□□□□ 0.6
CLPX-203ENST00000558958 MAB21L3Q8N8X9 362 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 RNF34Q969K3 372 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 FCRL2Q96LA5 508 aaPredicted RBP18.78■□□□□ 0.6
CLPX-203ENST00000558958 CYP2S1Q96SQ9 504 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 SNRNP25Q9BV90 132 aaKnown RBP18.78■□□□□ 0.6
CLPX-203ENST00000558958 ARHGEF38Q9NXL2 777 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 FZD10Q9ULW2 581 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 HBS1LQ9Y450 684 aaKnown RBP18.78■□□□□ 0.6
CLPX-203ENST00000558958 DENND4CQ5VZ89 1909 aa18.78■□□□□ 0.6
CLPX-203ENST00000558958 SOBPA7XYQ1 873 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 KCNU1A8MYU2 1149 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 I6L893 689 aaPredicted RBP18.77■□□□□ 0.6
CLPX-203ENST00000558958 TBX10O75333 385 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 SLC2A3P11169 496 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 CXCR5P32302 372 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 RING1Q06587 406 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 SCAPQ12770 1279 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 TEAD2Q15562 447 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 ARL13BQ3SXY8 428 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 EXD1Q8NHP7 514 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 ACSF2Q96CM8 615 aaPredicted RBP18.77■□□□□ 0.6
CLPX-203ENST00000558958 APOL5Q9BWW9 433 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 KLF16Q9BXK1 252 aaPredicted RBP18.77■□□□□ 0.6
CLPX-203ENST00000558958 SLC46A2Q9BY10 475 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 TKTL2Q9H0I9 626 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 CARD9Q9H257 536 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 ANLNQ9NQW6 1124 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.77■□□□□ 0.6
CLPX-203ENST00000558958 CLDND1Q9NY35 253 aa18.77■□□□□ 0.6
CLPX-203ENST00000558958 MRPS23Q9Y3D9 190 aaKnown RBP18.77■□□□□ 0.6
CLPX-203ENST00000558958 TRAV19A0A0A6YYK7 116 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 SRGAP2O75044 1071 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 ZRANB2O95218 330 aaKnown RBP eCLIP18.77■□□□□ 0.59
CLPX-203ENST00000558958 PYGMP11217 842 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 MBL2P11226 248 aaPredicted RBP18.77■□□□□ 0.59
CLPX-203ENST00000558958 LTBRP36941 435 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 SLC7A9P82251 487 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 COG7P83436 770 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 DLX2Q07687 328 aaPredicted RBP18.77■□□□□ 0.59
CLPX-203ENST00000558958 ARHGAP15Q53QZ3 475 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 GPR158Q5T848 1215 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 MICALL1Q8N3F8 863 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 COG1Q8WTW3 980 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 RAPGEF5Q92565 580 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 HSPH1Q92598 858 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 PABPC5Q96DU9 382 aaKnown RBP18.77■□□□□ 0.59
CLPX-203ENST00000558958 PBKQ96KB5 322 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 ZFRQ96KR1 1074 aaKnown RBP18.77■□□□□ 0.59
CLPX-203ENST00000558958 S1PR5Q9H228 398 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 ADAM7Q9H2U9 754 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 TASP1Q9H6P5 420 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 RRAGDQ9NQL2 400 aaPredicted RBP18.77■□□□□ 0.59
CLPX-203ENST00000558958 TMPRSS4Q9NRS4 437 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.77■□□□□ 0.59
CLPX-203ENST00000558958 KLHL11Q9NVR0 708 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 GPATCH2LQ9NWQ4 482 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 ZMYM5Q9UJ78 669 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 AP4E1Q9UPM8 1137 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 CLUHO75153 1309 aa18.77■□□□□ 0.59
CLPX-203ENST00000558958 CES2O00748 559 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 KRT1P04264 644 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 HMBSP08397 361 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 CEBPBP17676 345 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 ARSEP51690 589 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 ITIH3Q06033 890 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 DPYSL2Q16555 572 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 CA9Q16790 459 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 HABP4Q5JVS0 413 aaKnown RBP18.76■□□□□ 0.59
CLPX-203ENST00000558958 ZFYVE27Q5T4F4 411 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 Q7L0L9 218 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 RCOR2Q8IZ40 523 aa18.76■□□□□ 0.59
CLPX-203ENST00000558958 ITFG1Q8TB96 612 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms