RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 DCLK1O15075 740 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 MSI1O43347 362 aaKnown RBP22.41■■□□□ 1.18
CRNDE-205ENST00000558952 LATS1O95835 1130 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 CISD3P0C7P0 127 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 HNRNPLP14866 589 aaKnown RBP eCLIP22.41■■□□□ 1.18
CRNDE-205ENST00000558952 WASP42768 502 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 ZNF445P59923 1031 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 APBA1Q02410 837 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 MPPE1Q53F39 396 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 SCUBE3Q8IX30 993 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 STK32AQ8WU08 396 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 HMGB4Q8WW32 186 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 SHC3Q92529 594 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 FAM149B1Q96BN6 582 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 SPACA7Q96KW9 195 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 TRIM62Q9BVG3 475 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 FBXO10Q9UK96 956 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 CDV3Q9UKY7 258 aaKnown RBP22.41■■□□□ 1.18
CRNDE-205ENST00000558952 INVSQ9Y283 1065 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 SLC27A6Q9Y2P4 619 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 PCDHGA5Q9Y5G8 931 aa22.41■■□□□ 1.18
CRNDE-205ENST00000558952 GPR179Q6PRD1 2367 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 KCNJ18B7U540 433 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 NCAM1P13591 858 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 RPL34P49207 117 aaKnown RBP22.4■■□□□ 1.18
CRNDE-205ENST00000558952 KCNJ12Q14500 433 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 NUGGCQ68CJ6 796 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 SMYD5Q6GMV2 418 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 PRR23CQ6ZRP0 262 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 UNC45BQ8IWX7 931 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 FAM217AQ8IXS0 508 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 UCMAQ8WVF2 138 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 DUSP15Q9H1R2 295 aaPredicted RBP22.4■■□□□ 1.18
CRNDE-205ENST00000558952 ACP6Q9NPH0 428 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 DNAJC12Q9UKB3 198 aa22.4■■□□□ 1.18
CRNDE-205ENST00000558952 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.4■■□□□ 1.18
CRNDE-205ENST00000558952 BECN2A8MW95 431 aa22.39■■□□□ 1.17
CRNDE-205ENST00000558952 CAPN9O14815 690 aa22.39■■□□□ 1.17
CRNDE-205ENST00000558952 TBX4P57082 545 aa22.39■■□□□ 1.17
CRNDE-205ENST00000558952 PTK2Q05397 1052 aa22.39■■□□□ 1.17
CRNDE-205ENST00000558952 BYSLQ13895 437 aaKnown RBP22.39■■□□□ 1.17
CRNDE-205ENST00000558952 E2F5Q15329 346 aa22.39■■□□□ 1.17
CRNDE-205ENST00000558952 ADGRF1Q5T601 910 aa22.39■■□□□ 1.17
CRNDE-205ENST00000558952 ERMP1Q7Z2K6 904 aa22.39■■□□□ 1.17
CRNDE-205ENST00000558952 ANKS1BQ7Z6G8 1248 aa22.39■■□□□ 1.17
CRNDE-205ENST00000558952 C12orf50Q8NA57 414 aaPredicted RBP22.39■■□□□ 1.17
CRNDE-205ENST00000558952 SLC4A5Q9BY07 1137 aa22.39■■□□□ 1.17
CRNDE-205ENST00000558952 SLC2A11Q9BYW1 496 aa22.39■■□□□ 1.17
CRNDE-205ENST00000558952 TSPAN3O60637 253 aa22.38■■□□□ 1.17
CRNDE-205ENST00000558952 EEF1GP26641 437 aaKnown RBP22.38■■□□□ 1.17
CRNDE-205ENST00000558952 SLC11A2P49281 568 aa22.38■■□□□ 1.17
CRNDE-205ENST00000558952 RING1Q06587 406 aa22.38■■□□□ 1.17
CRNDE-205ENST00000558952 DGLUCYQ7Z3D6 616 aa22.38■■□□□ 1.17
CRNDE-205ENST00000558952 SERPINB11Q96P15 392 aa22.38■■□□□ 1.17
CRNDE-205ENST00000558952 ACOX2Q99424 681 aa22.38■■□□□ 1.17
CRNDE-205ENST00000558952 SIX2Q9NPC8 291 aa22.38■■□□□ 1.17
CRNDE-205ENST00000558952 DLL3Q9NYJ7 618 aa22.38■■□□□ 1.17
CRNDE-205ENST00000558952 STOML2Q9UJZ1 356 aa22.38■■□□□ 1.17
CRNDE-205ENST00000558952 HCN2Q9UL51 889 aa22.38■■□□□ 1.17
CRNDE-205ENST00000558952 ZNF292O60281 2723 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 E5RJQ4 531 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 GFRA2O00451 464 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 MAP3K13O43283 966 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 MPLP40238 635 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 CREB5Q02930 508 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 PDCLQ13371 301 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 MIIPQ5JXC2 388 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 OLIG1Q8TAK6 271 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 GPT2Q8TD30 523 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 NETO1Q8TDF5 533 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 TMA16Q96EY4 203 aaKnown RBP22.37■■□□□ 1.17
CRNDE-205ENST00000558952 P2RY11Q96G91 374 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 NOX5Q96PH1 765 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 GABRG3Q99928 467 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 SAMSN1Q9NSI8 373 aaKnown RBP22.37■■□□□ 1.17
CRNDE-205ENST00000558952 CACNA2D2Q9NY47 1150 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 NFE2L3Q9Y4A8 694 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 EML5Q05BV3 1969 aa22.37■■□□□ 1.17
CRNDE-205ENST00000558952 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.36■■□□□ 1.17
CRNDE-205ENST00000558952 NPC1O15118 1278 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 IGLV3-27P01718 113 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 TPM2P07951 284 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 ZNF806P0C7X5 589 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 KRT9P35527 623 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 P2RY2P41231 377 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 FOXK2Q01167 660 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 ARID5AQ03989 594 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 EIF4HQ15056 248 aaKnown RBP22.36■■□□□ 1.17
CRNDE-205ENST00000558952 CCDC6Q16204 474 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 GEN1Q17RS7 908 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 AASDHQ4L235 1098 aaPredicted RBP22.36■■□□□ 1.17
CRNDE-205ENST00000558952 TCP11X2Q5H9J9 407 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 PMS2CLQ68D20 193 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 BEND5Q7L4P6 421 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 TMEM110Q86TL2 294 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 DQX1Q8TE96 717 aaKnown RBP22.36■■□□□ 1.17
CRNDE-205ENST00000558952 IPO4Q8TEX9 1081 aaKnown RBP22.36■■□□□ 1.17
CRNDE-205ENST00000558952 RLN3Q8WXF3 142 aa22.36■■□□□ 1.17
CRNDE-205ENST00000558952 PIWIL1Q96J94 861 aaKnown RBP22.36■■□□□ 1.17
CRNDE-205ENST00000558952 DDX50Q9BQ39 737 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms