RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 KIAA1211LQ6NV74 962 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 TCEAL3Q969E4 200 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 THAP9Q9H5L6 903 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 POLMQ9NP87 494 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-208ENST00000558827 SIX2Q9NPC8 291 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 PLCB1Q9NQ66 1216 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 RXFP3Q9NSD7 469 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 ABCC13Q9NSE7 274 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 TAB2Q9NYJ8 693 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 MARK1Q9P0L2 795 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 EBF1Q9UH73 591 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 DNAJC12Q9UKB3 198 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 ZNF510Q9Y2H8 683 aa13.07□□□□□ -0.32
SMAD3-208ENST00000558827 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 CCDC163A0A0D9SF12 145 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 E5RJQ4 531 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 FOXN3O00409 490 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-208ENST00000558827 MAP3K13O43283 966 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 ALDH1A2O94788 518 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 CYBBP04839 570 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 FYNP06241 537 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 NCAM1P13591 858 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 NTSR1P30989 418 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 CHKAP35790 457 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 DHPSP49366 369 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-208ENST00000558827 HARS2P49590 506 aaKnown RBP13.06□□□□□ -0.32
SMAD3-208ENST00000558827 STILQ15468 1287 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 TAF5Q15542 800 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 MAN2A1Q16706 1144 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 VWA3BQ502W6 1294 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 PRR23CQ6ZRP0 262 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 NUDT18Q6ZVK8 323 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 TMEFF1Q8IYR6 380 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 PLD4Q96BZ4 506 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 HSFY1Q96LI6 401 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 TUBGCP2Q9BSJ2 902 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 OLA1Q9NTK5 396 aaKnown RBP13.06□□□□□ -0.32
SMAD3-208ENST00000558827 STIM2Q9P246 746 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 APEX2Q9UBZ4 518 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 CNTN6Q9UQ52 1028 aa13.06□□□□□ -0.32
SMAD3-208ENST00000558827 SYNJ2BP-COX16A0A087WUM0 186 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 KCNJ18B7U540 433 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 GRAP2O75791 330 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 EPN2O95208 641 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 MOCS2O96007 188 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 PENKP01210 267 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 GABRG2P18507 467 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 NUMBP49757 651 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 ATXN1P54253 815 aaKnown RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 TBX4P57082 545 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 PITX1P78337 314 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 RAPGEF1Q13905 1077 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 KCNJ12Q14500 433 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 ELF2Q15723 593 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 CSRP2Q16527 193 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 MIIPQ5JXC2 388 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 SYPL2Q5VXT5 272 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 SDE2Q6IQ49 451 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 DGLUCYQ7Z3D6 616 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 RASSF3Q86WH2 238 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 CACUL1Q86Y37 369 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 FAM114A1Q8IWE2 563 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 WDTC1Q8N5D0 677 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 DQX1Q8TE96 717 aaKnown RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 IPO4Q8TEX9 1081 aaKnown RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 GOLGA1Q92805 767 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 MYEOVQ96EZ4 313 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 PIWIL1Q96J94 861 aaKnown RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 LSM14BQ9BX40 385 aaKnown RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 CIPCQ9C0C6 399 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 VPS16Q9H269 839 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 NDST4Q9H3R1 872 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 CD93Q9NPY3 652 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 COX16Q9P0S2 106 aa13.05□□□□□ -0.32
SMAD3-208ENST00000558827 MBD1Q9UIS9 605 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 CDV3Q9UKY7 258 aaKnown RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 HBS1LQ9Y450 684 aaKnown RBP13.05□□□□□ -0.32
SMAD3-208ENST00000558827 A0A1W2PQF6 199 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 PAPSS1O43252 624 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 MED7O43513 233 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 TBL1XO60907 577 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 RHOBTB1O94844 696 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 ERCC5P28715 1186 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 SLC6A4P31645 630 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 MPLP40238 635 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 KLK7P49862 253 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 LMNB2Q03252 620 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 KCNMA1Q12791 1236 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 PUM1Q14671 1186 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 PREPLQ4J6C6 727 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 AASDHQ4L235 1098 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 TAF3Q5VWG9 929 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 MSANTD2Q6P1R3 559 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 KIAA1324Q6UXG2 1013 aaKnown RBP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 ENOSF1Q7L5Y1 443 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 TAC4Q86UU9 113 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 SLC47A2Q86VL8 602 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 GPR161Q8N6U8 529 aaKnown RBP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 ZNF366Q8N895 744 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms