RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 USP7Q93009 1102 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 LPPQ93052 612 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 NKD2Q969F2 451 aaPredicted RBP6.76□□□□□ -1.33
CLPX-202ENST00000558103 LENG9Q96B70 501 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 TCEANC2Q96MN5 208 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 NEK1Q96PY6 1258 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 PRRX2Q99811 253 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 ZMYND12Q9H0C1 365 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 TMEM117Q9H0C3 514 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 GLT8D2Q9H1C3 349 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 S1PR5Q9H228 398 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 C12orf65Q9H3J6 166 aaKnown RBP6.76□□□□□ -1.33
CLPX-202ENST00000558103 SEMA4AQ9H3S1 761 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 EMC7Q9NPA0 242 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 ST6GALNAC2Q9UJ37 374 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 OAZ3Q9UMX2 235 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 LZTS1Q9Y250 596 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 FANCMQ8IYD8 2048 aa6.76□□□□□ -1.33
CLPX-202ENST00000558103 CACNA1HO95180 2353 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 DOCK8Q8NF50 2099 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 PMS2P1A4D2B8 440 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 GOLGA8AA7E2F4 631 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 GOLGA8BA8MQT2 603 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 FOXS1O43638 330 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 ZNF623O75123 536 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 ADRB1P08588 477 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 PBX3P40426 434 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 VCPP55072 806 aaKnown RBP6.75□□□□□ -1.33
CLPX-202ENST00000558103 NFKB2Q00653 900 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 PFKFB3Q16875 520 aaPredicted RBP6.75□□□□□ -1.33
CLPX-202ENST00000558103 SPOUT1Q5T280 376 aaKnown RBP6.75□□□□□ -1.33
CLPX-202ENST00000558103 JAKMIP3Q5VZ66 844 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 PLPP4Q5VZY2 271 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 SWSAP1Q6NVH7 229 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 ANKRD54Q6NXT1 300 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 MIS18BP1Q6P0N0 1132 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 SYCE2Q6PIF2 218 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 SYNE3Q6ZMZ3 975 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 ESPNLQ6ZVH7 1005 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 SUGP1Q8IWZ8 645 aaKnown RBP6.75□□□□□ -1.33
CLPX-202ENST00000558103 LRRC43Q8N309 656 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 Q8TCH9 128 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 DYDC2Q96IM9 177 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 RPGRIP1Q96KN7 1286 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 CASD1Q96PB1 797 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 DPYSL5Q9BPU6 564 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 TCF25Q9BQ70 676 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 ZNF577Q9BSK1 485 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 C1QTNF3Q9BXJ4 246 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 PITHD1Q9GZP4 211 aaPredicted RBP6.75□□□□□ -1.33
CLPX-202ENST00000558103 HAPLN2Q9GZV7 340 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 MTG2Q9H4K7 406 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 ATP6V0A4Q9HBG4 840 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 MSL2Q9HCI7 577 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 TBC1D22BQ9NU19 505 aa6.75□□□□□ -1.33
CLPX-202ENST00000558103 ZFR2Q9UPR6 939 aaKnown RBP6.75□□□□□ -1.33
CLPX-202ENST00000558103 KLF18A0A0U1RQI7 1052 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 HIDE1A8MVS5 230 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 MAGEB2O15479 319 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 EDIL3O43854 480 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 CDC14BO60729 498 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 SRGAP2BP0DMP2 458 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 HOXB8P17481 243 aaPredicted RBP6.74□□□□□ -1.33
CLPX-202ENST00000558103 CIITAP33076 1130 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 SOX5P35711 763 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 PPM1AP35813 382 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 TECP42680 631 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 CLCN3P51790 818 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 NLRP11P59045 1033 aaKnown RBP6.74□□□□□ -1.33
CLPX-202ENST00000558103 ATP13A4Q4VNC1 1196 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 BMP2KLQ5H9B9 411 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 CLLU1OSQ5K130 101 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 BROXQ5VW32 411 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 FRMD7Q6ZUT3 714 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 STRA8Q7Z7C7 330 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 ECHDC2Q86YB7 292 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 SLC39A11Q8N1S5 342 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 METTL13Q8N6R0 699 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 OR14K1Q8NGZ2 314 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 CHAC2Q8WUX2 184 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 SLC5A5Q92911 643 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 WDR92Q96MX6 357 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 WWC2-AS2Q96NR7 200 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 TTC1Q99614 292 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 DEF6Q9H4E7 631 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 IFT22Q9H7X7 185 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 ENTPD7Q9NQZ7 604 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 GABBR1Q9UBS5 961 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 CDH22Q9UJ99 828 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 PCDHA10Q9Y5I2 948 aa6.74□□□□□ -1.33
CLPX-202ENST00000558103 A0A0U1RQF3 1178 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 C2orf78A6NCI8 922 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 NEMP1O14524 444 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 MSH4O15457 936 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 OPHN1O60890 802 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 PDGFBP01127 241 aaPredicted RBP6.73□□□□□ -1.33
CLPX-202ENST00000558103 DARSP14868 501 aaKnown RBP6.73□□□□□ -1.33
CLPX-202ENST00000558103 ZSCAN20P17040 1043 aaPredicted RBP6.73□□□□□ -1.33
CLPX-202ENST00000558103 AVPR2P30518 371 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 METAP2P50579 478 aaKnown RBP eCLIP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms