RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ATF7P17544 494 aaPredicted RBP3.91□□□□□ -1.78
SPG11-206ENST00000558093 DUSP1P28562 367 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 SLC8A1P32418 973 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 HSPA7P48741 367 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 RPS13P62277 151 aaKnown RBP3.91□□□□□ -1.78
SPG11-206ENST00000558093 FHL3Q13643 280 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 CSHL1Q14406 222 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 RABEP1Q15276 862 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 FAM110CQ1W6H9 321 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 MPEG1Q2M385 716 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 ARL6IP4Q66PJ3 421 aaKnown RBP3.91□□□□□ -1.78
SPG11-206ENST00000558093 CCDC144NLQ6NUI1 221 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 ZNF793Q6ZN11 406 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 CCDC146Q8IYE0 955 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 FAM186BQ8IYM0 893 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 ZNF398Q8TD17 642 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 PIGOQ8TEQ8 1089 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 SCARB1Q8WTV0 552 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 OVCA2Q8WZ82 227 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 PIGKQ92643 395 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 AKAP1Q92667 903 aaKnown RBP eCLIP3.91□□□□□ -1.78
SPG11-206ENST00000558093 MUL1Q969V5 352 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 KIAA1191Q96A73 305 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 KAZALD1Q96I82 304 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 TRIM2Q9C040 744 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 ARFGAP3Q9NP61 516 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 FBXO28Q9NVF7 368 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 ASNSD1Q9NWL6 643 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 ELOVL5Q9NYP7 299 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 SPATA31A1Q5TZJ5 1347 aa3.91□□□□□ -1.78
SPG11-206ENST00000558093 PNMA6EA0A0J9YXQ4 647 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 PPEF2O14830 753 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 CBFA2T3O75081 653 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 FGBP02675 491 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 MBPP02686 304 aaPredicted RBP3.9□□□□□ -1.79
SPG11-206ENST00000558093 CD63P08962 238 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 ABCB4P21439 1286 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 NDUFS1P28331 727 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 CPA2P48052 419 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 HSF1Q00613 529 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 BTKQ06187 659 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 MTA1Q13330 715 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 STARD3Q14849 445 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 ELF2Q15723 593 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 RAB30Q15771 203 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 FAM90A2PQ658T7 463 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 MRPL10Q7Z7H8 261 aaKnown RBP3.9□□□□□ -1.79
SPG11-206ENST00000558093 ANKRD13BQ86YJ7 626 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 UEVLDQ8IX04 471 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 OR52L2PQ8NGH6 319 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 DEPTORQ8TB45 409 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 IPO4Q8TEX9 1081 aaKnown RBP3.9□□□□□ -1.79
SPG11-206ENST00000558093 FCRL4Q96PJ5 515 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 FCRL5Q96RD9 977 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 SENP7Q9BQF6 1050 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 NUDT22Q9BRQ3 303 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 SCNM1Q9BWG6 230 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 SPRTNQ9H040 489 aaPredicted RBP3.9□□□□□ -1.79
SPG11-206ENST00000558093 NECTIN3Q9NQS3 549 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 HELLSQ9NRZ9 838 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 TM7SF3Q9NS93 570 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 SLC39A10Q9ULF5 831 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 CA14Q9ULX7 337 aa3.9□□□□□ -1.79
SPG11-206ENST00000558093 MAGED2Q9UNF1 606 aaPredicted RBP3.9□□□□□ -1.79
SPG11-206ENST00000558093 SIRT4Q9Y6E7 314 aaPredicted RBP3.9□□□□□ -1.79
SPG11-206ENST00000558093 CCDC187A0A096LP49 1063 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 OR2W5A6NFC9 320 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 MOSPD3O75425 235 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 PLAUP00749 431 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 ST6GAL1P15907 406 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 AKT1P31749 480 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 ALDH18A1P54886 795 aaKnown RBP3.89□□□□□ -1.79
SPG11-206ENST00000558093 CFHR1Q03591 330 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 STIM1Q13586 685 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 RBMS2Q15434 407 aaKnown RBP3.89□□□□□ -1.79
SPG11-206ENST00000558093 GLE1Q53GS7 698 aaKnown RBP3.89□□□□□ -1.79
SPG11-206ENST00000558093 PAPD7Q5XG87 772 aaKnown RBP3.89□□□□□ -1.79
SPG11-206ENST00000558093 C11orf87Q6NUJ2 197 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 PIK3AP1Q6ZUJ8 805 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 SYTL1Q8IYJ3 562 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.89□□□□□ -1.79
SPG11-206ENST00000558093 FAR2Q96K12 515 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 SGCZQ96LD1 299 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 SIGLEC11Q96RL6 698 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 ELAC2Q9BQ52 826 aaKnown RBP3.89□□□□□ -1.79
SPG11-206ENST00000558093 EPS8L2Q9H6S3 715 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 NLRC4Q9NPP4 1024 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 TMEM184CQ9NVA4 438 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 MTMR4Q9NYA4 1195 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 UBE2J1Q9Y385 318 aaPredicted RBP3.89□□□□□ -1.79
SPG11-206ENST00000558093 CACNA1IQ9P0X4 2223 aa3.89□□□□□ -1.79
SPG11-206ENST00000558093 SOCS2O14508 198 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 RRHO14718 337 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 PIP5K1BO14986 540 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 NPC1O15118 1278 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 CTIFO43310 598 aaKnown RBP3.88□□□□□ -1.79
SPG11-206ENST00000558093 GLP2RO95838 553 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
SPG11-206ENST00000558093 HOXD9P28356 352 aaPredicted RBP3.88□□□□□ -1.79
SPG11-206ENST00000558093 TECP42680 631 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms