RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 KIAA1324Q6UXG2 1013 aaKnown RBP16.73■□□□□ 0.27
SCFD1-224ENST00000557713 KRBA2Q6ZNG9 492 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 RGL4Q8IZJ4 473 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 TTC39CQ8N584 583 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 RBBP8NLQ8NC74 664 aaPredicted RBP16.73■□□□□ 0.27
SCFD1-224ENST00000557713 MKRN2Q9H000 416 aaKnown RBP16.73■□□□□ 0.27
SCFD1-224ENST00000557713 PRDM16Q9HAZ2 1276 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 CISHQ9NSE2 258 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 WSB2Q9NYS7 404 aaPredicted RBP16.73■□□□□ 0.27
SCFD1-224ENST00000557713 KLK13Q9UKR3 277 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 CLEC4EQ9ULY5 219 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 GON4LQ3T8J9 2241 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 ZZEF1O43149 2961 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 MAOBP27338 520 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 HNRNPDQ14103 355 aaKnown RBP16.72■□□□□ 0.27
SCFD1-224ENST00000557713 STARD3Q14849 445 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 PLEKHG6Q3KR16 790 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 WDR45BQ5MNZ6 344 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 PM20D1Q6GTS8 502 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 PIGZQ86VD9 579 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 DENND1CQ8IV53 801 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 FAM217AQ8IXS0 508 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 ARHGAP18Q8N392 663 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 CPXM2Q8N436 756 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 ANKRD52Q8NB46 1076 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 FBXL13Q8NEE6 735 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 DNASE2BQ8WZ79 361 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 TOE1Q96GM8 510 aaKnown RBP16.72■□□□□ 0.27
SCFD1-224ENST00000557713 RAB20Q9NX57 234 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 ELOVL2Q9NXB9 296 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 USP36Q9P275 1121 aaKnown RBP16.72■□□□□ 0.27
SCFD1-224ENST00000557713 SUSD2Q9UGT4 822 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 PCNX2A6NKB5 2137 aa16.72■□□□□ 0.27
SCFD1-224ENST00000557713 WDFY3Q8IZQ1 3526 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 KCNJ18B7U540 433 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 H0Y626 953 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 TRIM16O95361 564 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 YWHAGP61981 247 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCFD1-224ENST00000557713 KRT85P78386 507 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 EDRF1Q3B7T1 1238 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 CADM4Q8NFZ8 388 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 UCMAQ8WVF2 138 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 TATDN2Q93075 761 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 ARID3AQ99856 593 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 SLC2A11Q9BYW1 496 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 MARCH2Q9P0N8 246 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 NFE2L3Q9Y4A8 694 aa16.71■□□□□ 0.27
SCFD1-224ENST00000557713 A0A1W2PQ27 194 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 A0A1W2PQ64 194 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 SLC12A8A0AV02 714 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 SRRM3A6NNA2 597 aaPredicted RBP16.7■□□□□ 0.26
SCFD1-224ENST00000557713 SH3BP5O60239 455 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 GNSP15586 552 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 MXI1P50539 228 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 TPMTP51580 245 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 TKTL1P51854 596 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 COPAP53621 1224 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 ZNF234Q14588 700 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 TRIP4Q15650 581 aaPredicted RBP16.7■□□□□ 0.26
SCFD1-224ENST00000557713 TMEM215Q68D42 235 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 BHLHA9Q7RTU4 235 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 ANKS1BQ7Z6G8 1248 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 TMPRSS6Q8IU80 811 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 CHCHD4Q8N4Q1 142 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 EEF2KMTQ96G04 330 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 CAMK1GQ96NX5 476 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 GPR174Q9BXC1 333 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 GOLPH3LQ9H4A5 285 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 STRIP2Q9ULQ0 834 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 SPEGQ15772 3267 aa16.7■□□□□ 0.26
SCFD1-224ENST00000557713 A0A1B0GTW7 788 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 METTL12A8MUP2 240 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 TULP2O00295 520 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 TIMM44O43615 452 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 STX10O60499 249 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 ZNF202O95125 648 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 ZBED1O96006 694 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 IGLV3-19P01714 112 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 CYBBP04839 570 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 NCAM1P13591 858 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 OXTRP30559 389 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 RDXP35241 583 aaKnown RBP16.69■□□□□ 0.26
SCFD1-224ENST00000557713 EIF4HQ15056 248 aaKnown RBP16.69■□□□□ 0.26
SCFD1-224ENST00000557713 E2F5Q15329 346 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 TRIP6Q15654 476 aaKnown RBP16.69■□□□□ 0.26
SCFD1-224ENST00000557713 ZNF423Q2M1K9 1284 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 RSRC2Q7L4I2 434 aaKnown RBP16.69■□□□□ 0.26
SCFD1-224ENST00000557713 RAB44Q7Z6P3 723 aaPredicted RBP16.69■□□□□ 0.26
SCFD1-224ENST00000557713 DDI1Q8WTU0 396 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 ZCCHC14Q8WYQ9 949 aaKnown RBP16.69■□□□□ 0.26
SCFD1-224ENST00000557713 NDRG1Q92597 394 aaKnown RBP16.69■□□□□ 0.26
SCFD1-224ENST00000557713 PLD4Q96BZ4 506 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 SIPA1Q96FS4 1042 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 ULBP1Q9BZM6 244 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 ZDHHC5Q9C0B5 715 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 COQ4Q9Y3A0 265 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 IGF2RP11717 2491 aa16.69■□□□□ 0.26
SCFD1-224ENST00000557713 CETN3O15182 167 aa16.68■□□□□ 0.26
SCFD1-224ENST00000557713 SYNCRIPO60506 623 aaKnown RBP16.68■□□□□ 0.26
SCFD1-224ENST00000557713 CAPNS1P04632 268 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms