RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CCDC33Q8N5R6 958 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 ACTRT2Q8TDY3 377 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 PPP4R1Q8TF05 950 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 DEPDC1BQ8WUY9 529 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 RXFP2Q8WXD0 754 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 CMTM5Q96DZ9 223 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 WNK4Q96J92 1243 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 GORASP1Q9BQQ3 440 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 SPATA16Q9BXB7 569 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 NRDE2Q9H7Z3 1164 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 PTPRHQ9HD43 1115 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 SMYD2Q9NRG4 433 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 MOCS1Q9NZB8 636 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 DCDC2Q9UHG0 476 aa16.83■□□□□ 0.28
SHMT2-232ENST00000557487 ACKR2O00590 384 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 MDM4O15151 490 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 ALDH1A2O94788 518 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 SERPINE1P05121 402 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 RBL1P28749 1068 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 GSTT1P30711 240 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 NR2C2P49116 596 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 MED21Q13503 144 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 TUBB3Q13509 450 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 FASTKD1Q53R41 847 aaKnown RBP16.82■□□□□ 0.28
SHMT2-232ENST00000557487 RASIP1Q5U651 963 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 CES4AQ5XG92 561 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 MBLAC2Q68D91 279 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 PGM2L1Q6PCE3 622 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 RASSF3Q86WH2 238 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 ZNF280CQ8ND82 737 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 CDKL2Q92772 493 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 BTBD9Q96Q07 612 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 KLHL4Q9C0H6 718 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 RPF1Q9H9Y2 349 aaKnown RBP16.82■□□□□ 0.28
SHMT2-232ENST00000557487 PPM1HQ9ULR3 514 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 CCDC195A0A1B0GUA6 201 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 TTLL13PA6NNM8 815 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 PDLIM1O00151 329 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 CYB561D2O14569 222 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 KITP10721 976 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 ACAT1P24752 427 aaKnown RBP16.82■□□□□ 0.28
SHMT2-232ENST00000557487 RPS6KA3P51812 740 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 NRLP54845 237 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 SNX16P57768 344 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 LAMTOR4Q0VGL1 99 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 BMPR2Q13873 1038 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 GRM2Q14416 872 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 TMEM132BQ14DG7 1078 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 DCAF15Q66K64 600 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 PQLC3Q8N755 202 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 CHST13Q8NET6 341 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 TUBGCP5Q96RT8 1024 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 PCYT2Q99447 389 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 EPB41L1Q9H4G0 881 aa16.82■□□□□ 0.28
SHMT2-232ENST00000557487 RLFQ13129 1914 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 SMIM31A0A1B0GVY4 71 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 HMX2A2RU54 273 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 ARHGAP42A6NI28 874 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 PABPC4LP0CB38 370 aaKnown RBP16.81■□□□□ 0.28
SHMT2-232ENST00000557487 CCDC130P13994 396 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 UQCRBP14927 111 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 IL4RP24394 825 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 SEMA5AQ13591 1074 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 TEDDM1Q5T9Z0 273 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 ATF7IP2Q5U623 682 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 RFX8Q6ZV50 586 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 ADGRF2Q8IZF7 708 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 CLPTM1LQ96KA5 538 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 HAPLN3Q96S86 360 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 ELOVL4Q9GZR5 314 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 PRDM16Q9HAZ2 1276 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 PCDH18Q9HCL0 1135 aa16.81■□□□□ 0.28
SHMT2-232ENST00000557487 MARCOQ9UEW3 520 aaPredicted RBP16.81■□□□□ 0.28
SHMT2-232ENST00000557487 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 IGKV6-21A0A0C4DH24 114 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 CASQ2O14958 399 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-232ENST00000557487 FARP2O94887 1054 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-232ENST00000557487 KRT19P08727 400 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 C6orf222P0C671 652 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-232ENST00000557487 TGFB3P10600 412 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 RAP1GAPP47736 663 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 SLC1A6P48664 564 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 UBAP2LQ14157 1087 aaKnown RBP16.8■□□□□ 0.28
SHMT2-232ENST00000557487 SLC5A9Q2M3M2 681 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 CNPY1Q3B7I2 92 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 MDH1BQ5I0G3 518 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 MROH9Q5TGP6 573 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 LCLAT1Q6UWP7 414 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 HACE1Q8IYU2 909 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 SEPT1Q8WYJ6 367 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 NAT9Q9BTE0 207 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 FZD8Q9H461 694 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 SIX4Q9UIU6 781 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 TNFSF13BQ9Y275 285 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 DNAJC16Q9Y2G8 782 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 MAD1L1Q9Y6D9 718 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 LOC285556D6RIA3 1793 aa16.8■□□□□ 0.28
SHMT2-232ENST00000557487 COL11A1P12107 1806 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-232ENST00000557487 AP1G1O43747 822 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms