RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	TH	P07101	528 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	CYP21A2	P08686	494 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	ZNF16	P17020	682 aa	Predicted RBP	5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	AKAP5	P24588	427 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	ANTXR2	P58335	489 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	PTEN	P60484	403 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	AMPD2	Q01433	879 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	ITPRIPL2	Q3MIP1	535 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	FBXO43	Q4G163	708 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	SPDYC	Q5MJ68	293 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	TPGS2	Q68CL5	300 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	PKN3	Q6P5Z2	889 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	B3GNT9	Q6UX72	402 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	ANO5	Q75V66	913 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	SYT13	Q7L8C5	426 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	HAUS6	Q7Z4H7	955 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	ELMOD1	Q8N336	334 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	ZNF843	Q8N446	348 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	LZTR1	Q8N653	840 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	ZNF713	Q8N859	430 aa	Predicted RBP	5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	RNF149	Q8NC42	400 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	LENG9	Q96B70	501 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	RSPRY1	Q96DX4	576 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	HNRNPAB	Q99729	332 aa	Known RBP	5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	SH2D3A	Q9BRG2	576 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	NUSAP1	Q9BXS6	441 aa	Known RBP	5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	TRIM6	Q9C030	488 aa	Predicted RBP	5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	LNPK	Q9C0E8	428 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	DHX33	Q9H6R0	707 aa	Known RBP	5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	DIAPH3	Q9NSV4	1193 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	BARHL2	Q9NY43	387 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	GTSE1	Q9NYZ3	720 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	KIAA1522	Q9P206	1035 aa	Predicted RBP	5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	ATM	Q13315	3056 aa		5.18	□□□□□ -1.58
SCFD1-223	ENST00000557076	PTPRQ	Q9UMZ3	2332 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	TRBV23OR9-2	A0A075B6M9	112 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	TMEM150B	A6NC51	233 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	CASTOR2	A6NHX0	329 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	CCDC69	A6NI79	296 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	TMEM189-UBE2V1	I3L0A0	370 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	AURKA	O14965	403 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	MSH4	O15457	936 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	EDIL3	O43854	480 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	GAS7	O60861	476 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	PSMD10	O75832	226 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	B3GAT3	O94766	335 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	SEC24A	O95486	1093 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	ITGB3	P05106	788 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	ARF4	P18085	180 aa	Predicted RBP	5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	DRD1	P21728	446 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	HOXD12	P35452	270 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	DPP6	P42658	865 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	PSMC5	P62195	406 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	FAM193A	P78312	1265 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	SLC14A1	Q13336	389 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	MXD4	Q14582	209 aa	Predicted RBP	5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	TRIP6	Q15654	476 aa	Known RBP	5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	NAB2	Q15742	525 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	TRIM61	Q5EBN2	209 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	LRCH2	Q5VUJ6	765 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	JAKMIP3	Q5VZ66	844 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	FBXW10	Q5XX13	1052 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	FSTL4	Q6MZW2	842 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	SLC27A1	Q6PCB7	646 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	CD300LG	Q6UXG3	332 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	SYT12	Q8IV01	421 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	MB21D2	Q8IYB1	491 aa	Predicted RBP	5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	HDDC3	Q8N4P3	179 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	CCDC26	Q8TAB7	109 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	CEP76	Q8TAP6	659 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	MDM1	Q8TC05	714 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	HASPIN	Q8TF76	798 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	TCP11	Q8WWU5	503 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	PIGK	Q92643	395 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	SLC5A5	Q92911	643 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	TMEM143	Q96AN5	459 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	NFKBIZ	Q9BYH8	718 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	UNC45A	Q9H3U1	944 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	NXF3	Q9H4D5	531 aa	Known RBP	5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	CLMP	Q9H6B4	373 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	CYP4F11	Q9HBI6	524 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	PCDH18	Q9HCL0	1135 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	ASAH2	Q9NR71	780 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	THG1L	Q9NWX6	298 aa	Known RBP	5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	SNTG2	Q9NY99	539 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	CEP72	Q9P209	647 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	CACNG4	Q9UBN1	327 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	DUSP10	Q9Y6W6	482 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	TEX15	Q9BXT5	2789 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	COL6A6	A6NMZ7	2263 aa		5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	SPTAN1	Q13813	2472 aa	Known RBP	5.17	□□□□□ -1.58
SCFD1-223	ENST00000557076	MYH9	P35579	1960 aa	Known RBP	5.16	□□□□□ -1.58
SCFD1-223	ENST00000557076	ESYT2	A0FGR8	921 aa		5.16	□□□□□ -1.58
SCFD1-223	ENST00000557076		H7C4K7	107 aa		5.16	□□□□□ -1.58
SCFD1-223	ENST00000557076	SH2B2	O14492	632 aa	Predicted RBP	5.16	□□□□□ -1.58
SCFD1-223	ENST00000557076	PTGES	O14684	152 aa		5.16	□□□□□ -1.58
SCFD1-223	ENST00000557076	CAPN9	O14815	690 aa		5.16	□□□□□ -1.58
SCFD1-223	ENST00000557076	CBFA2T2	O43439	604 aa		5.16	□□□□□ -1.58
SCFD1-223	ENST00000557076	DKC1	O60832	514 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
SCFD1-223	ENST00000557076	OPHN1	O60890	802 aa		5.16	□□□□□ -1.58

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