RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ADAM32Q8TC27 787 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 ACTRT1Q8TDG2 376 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.57□□□□□ -0.88
ACTN1-218ENST00000556343 KRT35Q92764 455 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 AZIN2Q96A70 460 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 RIPOR3Q96MK2 946 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 EPAS1Q99814 870 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 OSBPL2Q9H1P3 480 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 SLITRK6Q9H5Y7 841 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 TASP1Q9H6P5 420 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 CCSER2Q9H7U1 834 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 ZNF334Q9HCZ1 680 aaPredicted RBP9.57□□□□□ -0.88
ACTN1-218ENST00000556343 PIGVQ9NUD9 493 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 OSER1Q9NX31 292 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 ARHGEF38Q9NXL2 777 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 DNMT3BQ9UBC3 853 aaKnown RBP9.57□□□□□ -0.88
ACTN1-218ENST00000556343 FZD10Q9ULW2 581 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 EFR3BQ9Y2G0 817 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 MTCH2Q9Y6C9 303 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 NLRC5Q86WI3 1866 aa9.57□□□□□ -0.88
ACTN1-218ENST00000556343 PLXNA4Q9HCM2 1894 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 GOLGA6L10A0A0M3HER8 536 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 ZNF487B1APH4 448 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 PGRMC1O00264 195 aaKnown RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 COCHO43405 550 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 PAPLNO95428 1278 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 TBX18O95935 607 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 OAS1P00973 400 aaKnown RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 CKMP06732 381 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 HMBSP08397 361 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 FSHRP23945 695 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 MTHFRP42898 656 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 SLC7A9P82251 487 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 KCNC3Q14003 757 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 PPP2R5EQ16537 467 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 LONRF2Q1L5Z9 754 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 SMTNL2Q2TAL5 461 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 ZC3H12AQ5D1E8 599 aaKnown RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 TFDP3Q5H9I0 405 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 KCNT1Q5JUK3 1230 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 RARS2Q5T160 578 aaKnown RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 GPR158Q5T848 1215 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 TXNDC8Q6A555 127 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 EP400NLQ6ZTU2 488 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 GRASPQ7Z6J2 395 aaPredicted RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 GPR149Q86SP6 731 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 ARFGAP1Q8N6T3 406 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 MAB21L3Q8N8X9 362 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 RNF25Q96BH1 459 aaPredicted RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 ZNF707Q96C28 371 aaPredicted RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 RPGRIP1Q96KN7 1286 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 BTN2A3PQ96KV6 586 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 C1orf74Q96LT6 269 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 PSMB7Q99436 277 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 SNRNP25Q9BV90 132 aaKnown RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 CALN1Q9BXU9 219 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 LRRC3Q9BY71 257 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 OSBPL8Q9BZF1 889 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 DHX35Q9H5Z1 703 aaKnown RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 RETREG1Q9H6L5 497 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 IL21Q9HBE4 155 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 WDR6Q9NNW5 1121 aaKnown RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 HOMER3Q9NSC5 361 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 RCOR3Q9P2K3 495 aaPredicted RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 NUDT5Q9UKK9 219 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 TTC7AQ9ULT0 858 aaPredicted RBP9.56□□□□□ -0.88
ACTN1-218ENST00000556343 AP4E1Q9UPM8 1137 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 SH3BP1Q9Y3L3 701 aa9.56□□□□□ -0.88
ACTN1-218ENST00000556343 TYW5A2RUC4 315 aaKnown RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 KCNU1A8MYU2 1149 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 EEF2KO00418 725 aaKnown RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 LATS1O95835 1130 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 PYGMP11217 842 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 TFE3P19532 575 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 IL1R2P27930 398 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 L1CAMP32004 1257 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 CXCR5P32302 372 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 PTPN7P35236 360 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 HCAR3P49019 387 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 PGFP49763 221 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 ATXN1P54253 815 aaKnown RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 CYP4F8P98187 520 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 AMPD2Q01433 879 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 EIF4EBP2Q13542 120 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 TEAD2Q15562 447 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 DPYSL2Q16555 572 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 PPP6R3Q5H9R7 873 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 CCDC70Q6NSX1 233 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 SPOCD1Q6ZMY3 1216 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 GAREM2Q75VX8 874 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 RFX6Q8HWS3 928 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 RASGEF1CQ8N431 466 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 CCDC185Q8N715 623 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 C12orf76Q8N812 135 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 ARL14EPQ8N8R7 260 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 TTC13Q8NBP0 860 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 SLC39A13Q96H72 371 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 CAPZA3Q96KX2 299 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 RUNDC3BQ96NL0 473 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms