RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 DUSP12Q9UNI6 340 aa14.74□□□□□ -0.05
SNX6-206ENST00000556162 WNT6Q9Y6F9 365 aa14.74□□□□□ -0.05
SNX6-206ENST00000556162 NCOR1O75376 2440 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 DESP17661 470 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 GPD1P21695 349 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 CORO1AP31146 461 aaKnown RBP14.73□□□□□ -0.05
SNX6-206ENST00000556162 MAGEA1P43355 309 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 PFKPQ01813 784 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 CCDC14Q49A88 953 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 TRNP1Q6NT89 227 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 SND1Q7KZF4 910 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNX6-206ENST00000556162 DENND1CQ8IV53 801 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 OTUB2Q96DC9 234 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 PGAP3Q96FM1 320 aaPredicted RBP14.73□□□□□ -0.05
SNX6-206ENST00000556162 TBCBQ99426 244 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 LINC00597Q9H2U6 94 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 LUC7LQ9NQ29 371 aaKnown RBP14.73□□□□□ -0.05
SNX6-206ENST00000556162 SLC2A4RGQ9NR83 387 aa14.73□□□□□ -0.05
SNX6-206ENST00000556162 EIF3CLB5ME19 914 aaKnown RBP14.72□□□□□ -0.05
SNX6-206ENST00000556162 GREM1O60565 184 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 NDUFA10O95299 355 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 LCA5LO95447 670 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 IGLV3-27P01718 113 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 KLKB1P03952 638 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 CYP1A2P05177 515 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 TMEM253P0C7T8 217 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 SLC2A3P11169 496 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 CCR1P32246 355 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 PTPN9P43378 593 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 ZNF143P52747 638 aaPredicted RBP14.72□□□□□ -0.05
SNX6-206ENST00000556162 ATP11AP98196 1134 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 DEUP1Q05D60 604 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 EIF4EBP2Q13542 120 aaPredicted RBP14.72□□□□□ -0.05
SNX6-206ENST00000556162 ZC3H12AQ5D1E8 599 aaKnown RBP14.72□□□□□ -0.05
SNX6-206ENST00000556162 TRIM68Q6AZZ1 485 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 TMEM139Q8IV31 216 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 BBS7Q8IWZ6 715 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 ADGRG2Q8IZP9 1017 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 CSGALNACT1Q8TDX6 532 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 ATP2A3Q93084 1043 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 SLC39A13Q96H72 371 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 FCRL2Q96LA5 508 aaPredicted RBP14.72□□□□□ -0.05
SNX6-206ENST00000556162 EIF3CQ99613 913 aaKnown RBP14.72□□□□□ -0.05
SNX6-206ENST00000556162 PACSIN1Q9BY11 444 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 TRPV5Q9NQA5 729 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 SLC12A6Q9UHW9 1150 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 AGO1Q9UL18 857 aaKnown RBP14.72□□□□□ -0.05
SNX6-206ENST00000556162 PAXBP1Q9Y5B6 917 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 TTC28Q96AY4 2481 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 TMEM191CA6NGB0 347 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 APOEP02649 317 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 TFE3P19532 575 aaPredicted RBP14.72□□□□□ -0.05
SNX6-206ENST00000556162 SLC11A2P49281 568 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 CDO1Q16878 200 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 EML3Q32P44 896 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 RAD9BQ6WBX8 426 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 Q6ZNB5 142 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 DNASE1L2Q92874 299 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 ARHGEF26Q96DR7 871 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 ASIC4Q96FT7 647 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 EBF3Q9H4W6 596 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 INTUQ9ULD6 942 aa14.72□□□□□ -0.05
SNX6-206ENST00000556162 ARNTLO00327 626 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 ENDOD1O94919 500 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 NFATC1O95644 943 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 RDXP35241 583 aaKnown RBP14.71□□□□□ -0.05
SNX6-206ENST00000556162 CHKAP35790 457 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 TNK2Q07912 1038 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 NR1H3Q13133 447 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 RUNX3Q13761 415 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 PPP2R5DQ14738 602 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 C15orf59Q2T9L4 293 aaPredicted RBP14.71□□□□□ -0.05
SNX6-206ENST00000556162 OTUD1Q5VV17 481 aaPredicted RBP14.71□□□□□ -0.05
SNX6-206ENST00000556162 STRADAQ7RTN6 431 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 LRRC8AQ8IWT6 810 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 CCDC112Q8NEF3 446 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 AZIN2Q96A70 460 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 CNPY3Q9BT09 278 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 NUP85Q9BW27 656 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 ADAM33Q9BZ11 813 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 WDCPQ9H6R7 721 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 PIGVQ9NUD9 493 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 GTSE1Q9NYZ3 720 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 CALCOCO1Q9P1Z2 691 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 CTTNBP2NLQ9P2B4 639 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 PCDHA13Q9Y5I0 950 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 BDP1A6H8Y1 2624 aa14.71□□□□□ -0.05
SNX6-206ENST00000556162 HELZP42694 1942 aaKnown RBP14.71□□□□□ -0.06
SNX6-206ENST00000556162 DCXO43602 365 aa14.7□□□□□ -0.06
SNX6-206ENST00000556162 NRDCO43847 1150 aa14.7□□□□□ -0.06
SNX6-206ENST00000556162 LATS1O95835 1130 aa14.7□□□□□ -0.06
SNX6-206ENST00000556162 MOCS2O96007 188 aaPredicted RBP14.7□□□□□ -0.06
SNX6-206ENST00000556162 ALADP13716 330 aa14.7□□□□□ -0.06
SNX6-206ENST00000556162 ARSAP15289 507 aa14.7□□□□□ -0.06
SNX6-206ENST00000556162 PSMA2P25787 234 aa14.7□□□□□ -0.06
SNX6-206ENST00000556162 CXCR3P49682 368 aa14.7□□□□□ -0.06
SNX6-206ENST00000556162 MTA1Q13330 715 aa14.7□□□□□ -0.06
SNX6-206ENST00000556162 ITPRIPL2Q3MIP1 535 aa14.7□□□□□ -0.06
SNX6-206ENST00000556162 BNIPLQ7Z465 357 aa14.7□□□□□ -0.06
SNX6-206ENST00000556162 CPA6Q8N4T0 437 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms