RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.22■□□□□ 0.67
NEDD1-208ENST00000555806 SPAG17Q6Q759 2223 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 RHOBTB1O94844 696 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 CISD3P0C7P0 127 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 ACADSBP45954 432 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 CCDC6Q16204 474 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 VWA3BQ502W6 1294 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 MSANTD2Q6P1R3 559 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 PRR23CQ6ZRP0 262 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 C11orf74Q86VG3 221 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 FAM149B1Q96BN6 582 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 TUBGCP2Q9BSJ2 902 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 DUSP15Q9H1R2 295 aaPredicted RBP19.21■□□□□ 0.67
NEDD1-208ENST00000555806 CDV3Q9UKY7 258 aaKnown RBP19.21■□□□□ 0.67
NEDD1-208ENST00000555806 HCN2Q9UL51 889 aa19.21■□□□□ 0.67
NEDD1-208ENST00000555806 RALGAPA1Q6GYQ0 2036 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 BECN2A8MW95 431 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 GOLGA6L22H0YM25 854 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 SART1O43290 800 aaKnown RBP19.2■□□□□ 0.66
NEDD1-208ENST00000555806 TSPAN3O60637 253 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 NCAM1P13591 858 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 PUM1Q14671 1186 aaKnown RBP eCLIP19.2■□□□□ 0.66
NEDD1-208ENST00000555806 MEA1Q16626 185 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 SCUBE3Q8IX30 993 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 FAM217AQ8IXS0 508 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 SHC3Q92529 594 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 SPACA7Q96KW9 195 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 ACOX2Q99424 681 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 NDST4Q9H3R1 872 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 FBXO10Q9UK96 956 aa19.2■□□□□ 0.66
NEDD1-208ENST00000555806 DMXL1Q9Y485 3027 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 KCNJ18B7U540 433 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 ZBTB24O43167 697 aaPredicted RBP19.19■□□□□ 0.66
NEDD1-208ENST00000555806 SDHBP21912 280 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 TBX4P57082 545 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 KCNJ12Q14500 433 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 MPPE1Q53F39 396 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 ERLEC1Q96DZ1 483 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 SIX2Q9NPC8 291 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 CACNA2D2Q9NY47 1150 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 DNAJC12Q9UKB3 198 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 AJAP1Q9UKB5 411 aaPredicted RBP19.19■□□□□ 0.66
NEDD1-208ENST00000555806 SLC27A6Q9Y2P4 619 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 PCDHGA5Q9Y5G8 931 aa19.19■□□□□ 0.66
NEDD1-208ENST00000555806 MYO18AQ92614 2054 aaKnown RBP19.18■□□□□ 0.66
NEDD1-208ENST00000555806 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.18■□□□□ 0.66
NEDD1-208ENST00000555806 E5RJQ4 531 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 FOXD2O60548 495 aaPredicted RBP19.18■□□□□ 0.66
NEDD1-208ENST00000555806 LATS1O95835 1130 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 BCKDHBP21953 392 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 MPLP40238 635 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 RPL34P49207 117 aaKnown RBP19.18■□□□□ 0.66
NEDD1-208ENST00000555806 ZNF445P59923 1031 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 CREB5Q02930 508 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 GEN1Q17RS7 908 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 AASDHQ4L235 1098 aaPredicted RBP19.18■□□□□ 0.66
NEDD1-208ENST00000555806 CT47A1Q5JQC4 288 aaPredicted RBP19.18■□□□□ 0.66
NEDD1-208ENST00000555806 MIIPQ5JXC2 388 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 ADGRF1Q5T601 910 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 NUGGCQ68CJ6 796 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 PMS2CLQ68D20 193 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 DGLUCYQ7Z3D6 616 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 ANKS1BQ7Z6G8 1248 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 PASD1Q8IV76 773 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 UNC45BQ8IWX7 931 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 C12orf50Q8NA57 414 aaPredicted RBP19.18■□□□□ 0.66
NEDD1-208ENST00000555806 OLIG1Q8TAK6 271 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 GPT2Q8TD30 523 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 DQX1Q8TE96 717 aaKnown RBP19.18■□□□□ 0.66
NEDD1-208ENST00000555806 STK32AQ8WU08 396 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 UCMAQ8WVF2 138 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 RLN3Q8WXF3 142 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 SERPINB11Q96P15 392 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 SLC4A5Q9BY07 1137 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 SAMSN1Q9NSI8 373 aaKnown RBP19.18■□□□□ 0.66
NEDD1-208ENST00000555806 DLL3Q9NYJ7 618 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 CYTH4Q9UIA0 394 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 CLEC4EQ9ULY5 219 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 NAALADL1Q9UQQ1 740 aa19.18■□□□□ 0.66
NEDD1-208ENST00000555806 SDK1Q7Z5N4 2213 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 CAPN9O14815 690 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 MAP3K13O43283 966 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 SLC11A2P49281 568 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 PTK2Q05397 1052 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 PDCLQ13371 301 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 SF3A2Q15428 464 aaKnown RBP19.17■□□□□ 0.66
NEDD1-208ENST00000555806 ERMP1Q7Z2K6 904 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 NETO1Q8TDF5 533 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 IPO4Q8TEX9 1081 aaKnown RBP19.17■□□□□ 0.66
NEDD1-208ENST00000555806 TMA16Q96EY4 203 aaKnown RBP19.17■□□□□ 0.66
NEDD1-208ENST00000555806 GABRG3Q99928 467 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 TRIM62Q9BVG3 475 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 SLC2A11Q9BYW1 496 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 STOML2Q9UJZ1 356 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 NFE2L3Q9Y4A8 694 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 RAD54BQ9Y620 910 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 CEP250Q9BV73 2442 aa19.17■□□□□ 0.66
NEDD1-208ENST00000555806 A0A1W2PQF6 199 aa19.16■□□□□ 0.66
NEDD1-208ENST00000555806 PAPSS1O43252 624 aaPredicted RBP19.16■□□□□ 0.66
NEDD1-208ENST00000555806 IGLV3-27P01718 113 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms