RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CXCR3P49682 368 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 ARSEP51690 589 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 CLCN4P51793 760 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 AIF1P55008 147 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 DYNLT1P63172 113 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 DPYSL3Q14195 570 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 NAA30Q147X3 362 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 PPM1LQ5SGD2 360 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 C10orf120Q5SQS8 335 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 C8orf74Q6P047 294 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 ANKS1BQ7Z6G8 1248 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 DNAJB7Q7Z6W7 309 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 TADA2BQ86TJ2 420 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 NTAN1Q96AB6 310 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 TRMT2BQ96GJ1 504 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 SERPINB11Q96P15 392 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 KCTD15Q96SI1 283 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 RHOXF2Q9BQY4 288 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 HERPUD2Q9BSE4 406 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 KRTAP3-3Q9BYR6 98 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 NACA2Q9H009 215 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 TKTL2Q9H0I9 626 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 DDX47Q9H0S4 455 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 SLC28A3Q9HAS3 691 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 WDR6Q9NNW5 1121 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 TMPRSS4Q9NRS4 437 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 UXTQ9UBK9 157 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 NR2E1Q9Y466 385 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 ASB3Q9Y575 518 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 MTCL1Q9Y4B5 1905 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 SLC12A8A0AV02 714 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 H3BRJ5 948 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 CCL16O15467 120 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 CTIFO43310 598 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 CREB3O43889 395 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 TLR5O60602 858 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 CLASP2O75122 1294 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 PHF2O75151 1096 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 IGLV3-25P01717 112 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 HMBSP08397 361 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 ZDHHC11BP0C7U3 371 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 CCR1P32246 355 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 BMP8BP34820 402 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 ARL4AP40617 200 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 TBX4P57082 545 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 SNX1Q13596 522 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 CAMK1Q14012 370 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 TFDP2Q14188 446 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 ELF2Q15723 593 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 DPYSL2Q16555 572 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 ANKRD20A8PQ5CZ79 823 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 BRMS1LQ5PSV4 323 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 PSTKQ8IV42 348 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 TDHQ8IZJ6 230 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 PYROXD2Q8N2H3 581 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 PRELID2Q8N945 189 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 CCDC26Q8TAB7 109 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 C1orf54Q8WWF1 131 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 PSMG2Q969U7 264 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 MAGOHBQ96A72 148 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 HAUS1Q96CS2 278 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 MYRFLQ96LU7 910 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 CDK5RAP1Q96SZ6 601 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 LRRC1Q9BTT6 524 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 MAGEB5Q9BZ81 275 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 LMAN2LQ9H0V9 348 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 CCSER2Q9H7U1 834 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 MAN1C1Q9NR34 630 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 TMEM51Q9NW97 253 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 MARCH2Q9P0N8 246 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 EFR3BQ9Y2G0 817 aa10.02□□□□□ -0.81
HNRNPC-220ENST00000555585 ZNF840PA6NDX5 716 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 EEF2KO00418 725 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 APOL1O14791 398 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 PER2O15055 1255 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 DAPK3O43293 454 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 CST8O60676 142 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 TBX18O95935 607 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 MOCS2O96007 188 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 APOEP02649 317 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 EPCAMP16422 314 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 CHRNA3P32297 505 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 ATP5C1P36542 298 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 COILP38432 576 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 PPP3CCP48454 512 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 MRPS25P82663 173 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 ADCY2Q08462 1091 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 KLF1Q13351 362 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 PPP2R5DQ14738 602 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 SIX1Q15475 284 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 TRIP4Q15650 581 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 TAZQ16635 292 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 PABPC1LQ4VXU2 614 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 HECTD3Q5T447 861 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 BBS12Q6ZW61 710 aa10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 RBM23Q86U06 439 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-220ENST00000555585 MIB1Q86YT6 1006 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms