RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 NMUR1Q9HB89 426 aa11.39□□□□□ -0.59
TDP1-212ENST00000555565 CYLDQ9NQC7 956 aa11.39□□□□□ -0.59
TDP1-212ENST00000555565 TLR8Q9NR97 1041 aaKnown RBP11.39□□□□□ -0.59
TDP1-212ENST00000555565 SCML2Q9UQR0 700 aa11.39□□□□□ -0.59
TDP1-212ENST00000555565 SH3BP1Q9Y3L3 701 aa11.39□□□□□ -0.59
TDP1-212ENST00000555565 STARD13Q9Y3M8 1113 aa11.39□□□□□ -0.59
TDP1-212ENST00000555565 CYP26A1O43174 497 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 HOXC11O43248 304 aaPredicted RBP11.38□□□□□ -0.59
TDP1-212ENST00000555565 NDUFV2P19404 249 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 TRIM21P19474 475 aaKnown RBP11.38□□□□□ -0.59
TDP1-212ENST00000555565 ACO1P21399 889 aaKnown RBP11.38□□□□□ -0.59
TDP1-212ENST00000555565 PRCPP42785 496 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 GAD2Q05329 585 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 PPP1R26Q5T8A7 1209 aaPredicted RBP11.38□□□□□ -0.59
TDP1-212ENST00000555565 KRT39Q6A163 491 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 HTR3DQ70Z44 454 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 ZNF513Q8N8E2 541 aaPredicted RBP11.38□□□□□ -0.59
TDP1-212ENST00000555565 NAT16Q8N8M0 369 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 FBXL13Q8NEE6 735 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 DNASE2BQ8WZ79 361 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 SLC39A7Q92504 469 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 JAKMIP2Q96AA8 810 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 FAM124BQ9H5Z6 455 aaPredicted RBP11.38□□□□□ -0.59
TDP1-212ENST00000555565 PNPLA8Q9NP80 782 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 SPHK2Q9NRA0 654 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 CYP8B1Q9UNU6 501 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 PCDHA5Q9Y5H7 936 aa11.38□□□□□ -0.59
TDP1-212ENST00000555565 ZNF462Q96JM2 2506 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 A0A1W2PQH9 124 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 TBC1D3BA6NDS4 549 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.37□□□□□ -0.59
TDP1-212ENST00000555565 CETN3O15182 167 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 ATXN7O15265 892 aaPredicted RBP11.37□□□□□ -0.59
TDP1-212ENST00000555565 ZNF217O75362 1048 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 TULP3O75386 442 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 ZNF883P0CG24 379 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 HOXB2P14652 356 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 ATP5C1P36542 298 aaKnown RBP11.37□□□□□ -0.59
TDP1-212ENST00000555565 WASP42768 502 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 MXI1P50539 228 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 KIF11P52732 1056 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 PMS1P54277 932 aaKnown RBP11.37□□□□□ -0.59
TDP1-212ENST00000555565 ZNF394Q53GI3 561 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 SCD5Q86SK9 330 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 CCDC150Q8NCX0 1101 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 ENGASEQ8NFI3 743 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 SPATA20Q8TB22 786 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 IPO4Q8TEX9 1081 aaKnown RBP11.37□□□□□ -0.59
TDP1-212ENST00000555565 ERCC4Q92889 916 aaPredicted RBP11.37□□□□□ -0.59
TDP1-212ENST00000555565 CCDC34Q96HJ3 373 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 FAXDC2Q96IV6 333 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 GSDMAQ96QA5 445 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 ARID3AQ99856 593 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 DUSP16Q9BY84 665 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 ZDHHC5Q9C0B5 715 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 SLC6A17Q9H1V8 727 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 PRORYQ9H606 182 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 CISHQ9NSE2 258 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.37□□□□□ -0.59
TDP1-212ENST00000555565 RAB20Q9NX57 234 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 NUDT5Q9UKK9 219 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 NAV2Q8IVL1 2488 aa11.37□□□□□ -0.59
TDP1-212ENST00000555565 MDM4O15151 490 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 EPB41P11171 864 aaKnown RBP11.36□□□□□ -0.59
TDP1-212ENST00000555565 RARGP13631 454 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 ITPKBP27987 946 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 NTSR1P30989 418 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 RAD23BP54727 409 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 SMAD1Q15797 465 aaKnown RBP11.36□□□□□ -0.59
TDP1-212ENST00000555565 ANO4Q32M45 955 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 CBWD6Q4V339 395 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 COBLL1Q53SF7 1204 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 CBWD3Q5JTY5 395 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 CBWD5Q5RIA9 395 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 ZNF658Q5TYW1 1059 aaPredicted RBP11.36□□□□□ -0.59
TDP1-212ENST00000555565 BTBD8Q5XKL5 378 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 EGFLAMQ63HQ2 1017 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 ANKRD40Q6AI12 368 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 KLHDC10Q6PID8 442 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 CCDC186Q7Z3E2 898 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 ZC3H3Q8IXZ2 948 aaKnown RBP11.36□□□□□ -0.59
TDP1-212ENST00000555565 RGL4Q8IZJ4 473 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 ZNF843Q8N446 348 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 TERB1Q8NA31 727 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 SLC4A11Q8NBS3 891 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 C1orf216Q8TAB5 229 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 SETD7Q8WTS6 366 aaKnown RBP11.36□□□□□ -0.59
TDP1-212ENST00000555565 TATDN2Q93075 761 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 MRGPRX1Q96LB2 322 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 HEXIM2Q96MH2 286 aaKnown RBP11.36□□□□□ -0.59
TDP1-212ENST00000555565 GABRG3Q99928 467 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 RMND1Q9NWS8 449 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 DEC1Q9P2X7 70 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 SUSD2Q9UGT4 822 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 FNDC3AQ9Y2H6 1198 aaKnown RBP11.36□□□□□ -0.59
TDP1-212ENST00000555565 RAI2Q9Y5P3 530 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 USP3Q9Y6I4 520 aa11.36□□□□□ -0.59
TDP1-212ENST00000555565 FAM149AA5PLN7 773 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 GOLGA6L4A6NEF3 574 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 SLC16A3O15427 465 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms