RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 IER2Q9BTL4 223 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 HCN2Q9UL51 889 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 CLEC4EQ9ULY5 219 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ZNF510Q9Y2H8 683 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 HBS1LQ9Y450 684 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 LGALS16A8MUM7 142 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 F8VZ95 297 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 HRO43593 1189 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 GFRA3O60609 400 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 GRAP2O75791 330 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 ERBB2P04626 1255 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 EIF2DP41214 584 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 TNFRSF4P43489 277 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 HARS2P49590 506 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PITX1P78337 314 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 IQCB1Q15051 598 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 MEA1Q16626 185 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 FYB2Q5VWT5 728 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 OR6B2Q6IFH4 312 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 MSANTD2Q6P1R3 559 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 TOGARAM2Q6ZUX3 1019 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 NOP9Q86U38 636 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 DQX1Q8TE96 717 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 GOLGA1Q92805 767 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PLD4Q96BZ4 506 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 BPIFA3Q9BQP9 254 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PDCL3Q9H2J4 239 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 DNAJC17Q9NVM6 304 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 MARK1Q9P0L2 795 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 SLC8A2Q9UPR5 921 aa12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 HELZP42694 1942 aaKnown RBP12.95□□□□□ -0.34
TRAPPC6B-205ENST00000555269 FRYLO94915 3013 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 MYO16Q9Y6X6 1858 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PRR23AA6NEV1 266 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 SMTNL1A8MU46 457 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PRRT4C9JH25 899 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 CAPN9O14815 690 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 LILRB5O75023 590 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PAPSS2O95340 614 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 KLF8O95600 359 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 MMEP08473 750 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 CHKAP35790 457 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 KIR2DL1P43626 348 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 NRLP54845 237 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 TBX4P57082 545 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 JAM2P57087 298 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 DMC1Q14565 340 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PPP2R5DQ14738 602 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PTPN20Q4JDL3 420 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 C2CD6Q53TS8 623 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 GRAMD4Q6IC98 578 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 RFWD3Q6PCD5 774 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 FAM183BPQ6ZVS7 135 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 ALLCQ8N6M5 410 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 SUMF1Q8NBK3 374 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 NEK11Q8NG66 645 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 SLC20A1Q8WUM9 679 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 CPA5Q8WXQ8 436 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 ERLEC1Q96DZ1 483 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 NAP1L5Q96NT1 182 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 XPO6Q96QU8 1125 aaKnown RBP12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 HHIPQ96QV1 700 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 TMEM121BQ9BXQ6 578 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 FAM126AQ9BYI3 521 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 FBXO10Q9UK96 956 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PCDHGA2Q9Y5H1 932 aa12.94□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 SGK1O00141 431 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 CACNG3O60359 315 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 PENKP01210 267 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 IGLV3-27P01718 113 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 LMNAP02545 664 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 HNRNPLP14866 589 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 CHRNB2P17787 502 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 SOX5P35711 763 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 WASP42768 502 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 MRPS21P82921 87 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 LPAL2Q16609 132 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 DCAF6Q58WW2 860 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 ZC3H12AQ5D1E8 599 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 C10orf76Q5T2E6 689 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 ZC3H14Q6PJT7 736 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 TMEM92Q6UXU6 159 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 SYT13Q7L8C5 426 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 TAC4Q86UU9 113 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 DEFB106AQ8N104 65 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 DCLK2Q8N568 766 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 DDI1Q8WTU0 396 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 TMA16Q96EY4 203 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 FCRL2Q96LA5 508 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 ERGIC2Q96RQ1 377 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 POPDC2Q9HBU9 364 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 CBX8Q9HC52 389 aa12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6B-205ENST00000555269 NOCTQ9UK39 431 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms