RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CORO2BQ9UQ03 480 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 SLC45A1Q9Y2W3 748 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 FER1L4A9Z1Z3 1794 aa6.06□□□□□ -1.44
VRK1-203ENST00000555067 A6NCN8 305 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 MBD3L4A6NDZ8 208 aaPredicted RBP6.05□□□□□ -1.44
VRK1-203ENST00000555067 MBD3L3A6NE82 208 aaPredicted RBP6.05□□□□□ -1.44
VRK1-203ENST00000555067 MYMKA6NI61 221 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 TMEM233B4DJY2 109 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 EYA2O00167 538 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 NCAM2O15394 837 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 INSIG1O15503 277 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 CCP110O43303 1012 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 SRGAP2O75044 1071 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 TMEM191BP0C7N4 346 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 SLC7A1P30825 629 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 TWIST1Q15672 202 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 PTCHD3Q3KNS1 767 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 INTS11Q5TA45 600 aaKnown RBP6.05□□□□□ -1.44
VRK1-203ENST00000555067 MZT2BQ6NZ67 158 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 FAM180BQ6P0A1 224 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 MAEAQ7L5Y9 396 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 ANKRD18AQ8IVF6 992 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 IL31RAQ8NI17 732 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.05□□□□□ -1.44
VRK1-203ENST00000555067 OSR1Q8TAX0 266 aaPredicted RBP6.05□□□□□ -1.44
VRK1-203ENST00000555067 DNAJB14Q8TBM8 379 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 MAML1Q92585 1016 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 TRIM5Q9C035 493 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 OSBPL5Q9H0X9 879 aaPredicted RBP6.05□□□□□ -1.44
VRK1-203ENST00000555067 ATP6V0A4Q9HBG4 840 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 PDP2Q9P2J9 529 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 PCDHGB2Q9Y5G2 931 aa6.05□□□□□ -1.44
VRK1-203ENST00000555067 H3BNC9 293 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 CD3EAPO15446 510 aaKnown RBP6.04□□□□□ -1.44
VRK1-203ENST00000555067 TMPRSS11DO60235 418 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 MBD4O95243 580 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 ICA1Q05084 483 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 ZNF543Q08ER8 600 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 LARS2Q15031 903 aaKnown RBP6.04□□□□□ -1.44
VRK1-203ENST00000555067 C10orf25Q5T742 122 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 SAMD14Q8IZD0 417 aaPredicted RBP6.04□□□□□ -1.44
VRK1-203ENST00000555067 LINC01465Q8N7H1 131 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 UBXN10Q96LJ8 280 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.04□□□□□ -1.44
VRK1-203ENST00000555067 ITM2CQ9NQX7 267 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 SMC4Q9NTJ3 1288 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 DNMT3BQ9UBC3 853 aaKnown RBP6.04□□□□□ -1.44
VRK1-203ENST00000555067 GJD2Q9UKL4 321 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 CRYL1Q9Y2S2 319 aa6.04□□□□□ -1.44
VRK1-203ENST00000555067 LOC102723971A0A1B0GUV8 181 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 RRN3P2A6NIE6 340 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 IFIT1P09914 478 aaKnown RBP6.03□□□□□ -1.44
VRK1-203ENST00000555067 MYF5P13349 255 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 APEHP13798 732 aaKnown RBP6.03□□□□□ -1.44
VRK1-203ENST00000555067 KLRC1P26715 233 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 UQCRC1P31930 480 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 TECP42680 631 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 STT3AP46977 705 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 TIRAPP58753 221 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 MPP1Q00013 466 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 TIAL1Q01085 375 aaKnown RBP eCLIP6.03□□□□□ -1.44
VRK1-203ENST00000555067 BLMHQ13867 455 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 PDE1CQ14123 709 aaPredicted RBP6.03□□□□□ -1.44
VRK1-203ENST00000555067 MYBPC2Q14324 1141 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 POLD3Q15054 466 aaPredicted RBP6.03□□□□□ -1.44
VRK1-203ENST00000555067 RBMS2Q15434 407 aaKnown RBP6.03□□□□□ -1.44
VRK1-203ENST00000555067 CCDC96Q2M329 555 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 CACHD1Q5VU97 1274 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 ANO7Q6IWH7 933 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 RETSATQ6NUM9 610 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 GGT6Q6P531 493 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 TMEM65Q6PI78 240 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 APOA5Q6Q788 366 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 OR56A3Q8NH54 315 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 CTHRC1Q96CG8 243 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 STARD7Q9NQZ5 370 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 GAR1Q9NY12 217 aaKnown RBP6.03□□□□□ -1.44
VRK1-203ENST00000555067 MAFFQ9ULX9 164 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 SNX13Q9Y5W8 968 aa6.03□□□□□ -1.44
VRK1-203ENST00000555067 RASAL1O95294 804 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 CD4P01730 458 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 CSTBP04080 98 aaKnown RBP6.02□□□□□ -1.45
VRK1-203ENST00000555067 DHRS4L1P0CG22 281 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 CAPN3P20807 821 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 DIO1P49895 249 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 COPB1P53618 953 aaKnown RBP6.02□□□□□ -1.45
VRK1-203ENST00000555067 HTRA4P83105 476 aaPredicted RBP6.02□□□□□ -1.45
VRK1-203ENST00000555067 HIBCHQ6NVY1 386 aaPredicted RBP6.02□□□□□ -1.45
VRK1-203ENST00000555067 PGBD2Q6P3X8 592 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 PDXDC1Q6P996 788 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 VSTM1Q6UX27 236 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 DCDC5Q6ZRR9 648 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 TBC1D1Q86TI0 1168 aaPredicted RBP6.02□□□□□ -1.45
VRK1-203ENST00000555067 MICU3Q86XE3 530 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 NRACQ8N912 160 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 APIPQ96GX9 242 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 TMEM41AQ96HV5 264 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 SERINC2Q96SA4 455 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 C22orf23Q9BZE7 217 aa6.02□□□□□ -1.45
VRK1-203ENST00000555067 BTBD1Q9H0C5 482 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms