RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 OLFM2O95897 454 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 IGLV3-27P01718 113 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 APOEP02649 317 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 SPATA31D3P0C874 917 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 DDX6P26196 483 aaKnown RBP eCLIP7.94□□□□□ -1.14
TDP1-209ENST00000554180 L1CAMP32004 1257 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 GTF2F1P35269 517 aaKnown RBP eCLIP7.94□□□□□ -1.14
TDP1-209ENST00000554180 ATP5C1P36542 298 aaKnown RBP7.94□□□□□ -1.14
TDP1-209ENST00000554180 ARL4AP40617 200 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 HCAR3P49019 387 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 ATXN1P54253 815 aaKnown RBP7.94□□□□□ -1.14
TDP1-209ENST00000554180 TBX4P57082 545 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 NRG1Q02297 640 aaPredicted RBP7.94□□□□□ -1.14
TDP1-209ENST00000554180 EFEMP1Q12805 493 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 SEMA3BQ13214 749 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 TFDP2Q14188 446 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 DPYSL3Q14195 570 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 KRT81Q14533 505 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 CYP1B1Q16678 543 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 ATP13A4Q4VNC1 1196 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 RAB6CQ53S08 254 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 NUGGCQ68CJ6 796 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 CHRDL2Q6WN34 429 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 SPATA31D4Q6ZUB0 917 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 BBS12Q6ZW61 710 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 TMEM150AQ86TG1 271 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 TMC8Q8IU68 726 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 CCDC185Q8N715 623 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 C12orf50Q8NA57 414 aaPredicted RBP7.94□□□□□ -1.14
TDP1-209ENST00000554180 TTC13Q8NBP0 860 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 MYRIPQ8NFW9 859 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 ADAM32Q8TC27 787 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 GDPD5Q8WTR4 605 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 TSC1Q92574 1164 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 HSPH1Q92598 858 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 MRPS31Q92665 395 aaKnown RBP7.94□□□□□ -1.14
TDP1-209ENST00000554180 RNF25Q96BH1 459 aaPredicted RBP7.94□□□□□ -1.14
TDP1-209ENST00000554180 PLD4Q96BZ4 506 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 MS4A14Q96JA4 679 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 RUNDC3BQ96NL0 473 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 CALN1Q9BXU9 219 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 LRRC3Q9BY71 257 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 RAB6CQ9H0N0 254 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 OSBPL2Q9H1P3 480 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 CCSER2Q9H7U1 834 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 TLE6Q9H808 572 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 CERS4Q9HA82 394 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 IL21Q9HBE4 155 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 PCDH18Q9HCL0 1135 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 DZANK1Q9NVP4 752 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 KLHL11Q9NVR0 708 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 MTMR10Q9NXD2 777 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 LMCD1Q9NZU5 365 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 HCFC2Q9Y5Z7 792 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 MYO16Q9Y6X6 1858 aa7.94□□□□□ -1.14
TDP1-209ENST00000554180 GREB1Q4ZG55 1949 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 SYNJ2BP-COX16A0A087WUM0 186 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 EPOPA6NHQ4 379 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 KCNU1A8MYU2 1149 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 PI4K2BG5E9Z4 385 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 H3BRJ5 948 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 APOC4-APOC2K7ER74 178 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 CCL16O15467 120 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 CTIFO43310 598 aaKnown RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 MSI1O43347 362 aaKnown RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 COCHO43405 550 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 PHF2O75151 1096 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 CSPG5O95196 566 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 APOC2P02655 101 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 SRGAP2BP0DMP2 458 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 EPCAMP16422 314 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 ZFXP17010 805 aaPredicted RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 PTPN2P17706 415 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 TGM2P21980 687 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 GABRR2P28476 465 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 HOXC13P31276 330 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 CHRNA3P32297 505 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 NRIP1P48552 1158 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 FNTAP49354 379 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 COG7P83436 770 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 KCNC3Q14003 757 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 SIX1Q15475 284 aaPredicted RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 CA9Q16790 459 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 GLE1Q53GS7 698 aaKnown RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 ZC3H12AQ5D1E8 599 aaKnown RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 PPP6R3Q5H9R7 873 aaPredicted RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 SLC9A4Q6AI14 798 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 CCDC70Q6NSX1 233 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 AADACL2Q6P093 401 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 DRICH1Q6PGQ1 229 aaPredicted RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 TMEM184AQ6ZMB5 413 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 GAREM2Q75VX8 874 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 ADGRD2Q7Z7M1 963 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 UNC45BQ8IWX7 931 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 MMGT1Q8N4V1 131 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 ATP6V0D2Q8N8Y2 350 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.93□□□□□ -1.14
TDP1-209ENST00000554180 RNF34Q969K3 372 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 AZIN2Q96A70 460 aa7.93□□□□□ -1.14
TDP1-209ENST00000554180 ACSF2Q96CM8 615 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms