RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 OSER1Q9NX31 292 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 STIM2Q9P246 746 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 SFMBT1Q9UHJ3 866 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 NUDT5Q9UKK9 219 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 TTC7AQ9ULT0 858 aaPredicted RBP10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 FZD10Q9ULW2 581 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 AP4E1Q9UPM8 1137 aa10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 HBS1LQ9Y450 684 aaKnown RBP10.87□□□□□ -0.67
TMEM55B-205ENST00000554028 KIAA1671Q9BY89 1806 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 PI4K2BG5E9Z4 385 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 H3BRJ5 948 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 RFXAPO00287 272 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 KRIT1O00522 736 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 DAPK3O43293 454 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 FGGP02679 453 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 POU2F2P09086 479 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 TCF4P15884 667 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 HDCP19113 662 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 IL1R2P27930 398 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 HARS2P49590 506 aaKnown RBP10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 PITX1P78337 314 aaPredicted RBP10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 TFDP2Q14188 446 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 PPP2R5EQ16537 467 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 ATP13A4Q4VNC1 1196 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 TFDP3Q5H9I0 405 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 NUGGCQ68CJ6 796 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 CCDC70Q6NSX1 233 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 SPOCD1Q6ZMY3 1216 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 BNIPLQ7Z465 357 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 ADGRD2Q7Z7M1 963 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 VSIG1Q86XK7 387 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 RAPGEF5Q92565 580 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 MS4A14Q96JA4 679 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 HAPLN3Q96S86 360 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 SNRNP25Q9BV90 132 aaKnown RBP10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 CARD6Q9BX69 1037 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 OSBPL8Q9BZF1 889 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 TKTL2Q9H0I9 626 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 CCSER2Q9H7U1 834 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 SFXN1Q9H9B4 322 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 PRDM16Q9HAZ2 1276 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 TRPC7Q9HCX4 862 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 HOMER3Q9NSC5 361 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 RCOR3Q9P2K3 495 aaPredicted RBP10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 ZMYM5Q9UJ78 669 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 EFR3BQ9Y2G0 817 aa10.86□□□□□ -0.67
TMEM55B-205ENST00000554028 CLUHO75153 1309 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 TRAV19A0A0A6YYK7 116 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 EPOPA6NHQ4 379 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 SOBPA7XYQ1 873 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 ZNF487B1APH4 448 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 RFPL2O75678 378 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 TBX18O95935 607 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 IGLV3-25P01717 112 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 MBL2P11226 248 aaPredicted RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 ZFXP17010 805 aaPredicted RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 DDX6P26196 483 aaKnown RBP eCLIP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 PTPN7P35236 360 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 SLC11A2P49281 568 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 PGFP49763 221 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 ATXN1P54253 815 aaKnown RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 RING1Q06587 406 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 SCAPQ12770 1279 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 DPYSL2Q16555 572 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 ZC3H12AQ5D1E8 599 aaKnown RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 PPP6R3Q5H9R7 873 aaPredicted RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 ZNF697Q5TEC3 545 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 KAZNQ674X7 775 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 TXNRD3NBQ6F5E7 133 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 MFSD7Q6UXD7 560 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 SLC13A5Q86YT5 568 aaPredicted RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 RFX6Q8HWS3 928 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 CCDC185Q8N715 623 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 TTC13Q8NBP0 860 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 SMG7Q92540 1137 aaKnown RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 PLD4Q96BZ4 506 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 ACSF2Q96CM8 615 aaPredicted RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 PEBP4Q96S96 227 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 EPAS1Q99814 870 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 ZNF670Q9BS34 389 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 HEMGNQ9BXL5 484 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 TMEM121BQ9BXQ6 578 aaPredicted RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 OSBPL2Q9H1P3 480 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 PCDH18Q9HCL0 1135 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 ZNF334Q9HCZ1 680 aaPredicted RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 WDR6Q9NNW5 1121 aaKnown RBP10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 KLHL11Q9NVR0 708 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 GPATCH2LQ9NWQ4 482 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 ARHGEF38Q9NXL2 777 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 NLRC5Q86WI3 1866 aa10.85□□□□□ -0.67
TMEM55B-205ENST00000554028 A0A1W2PRU2 124 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 CCDC188H7C350 402 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 RIOK3O14730 519 aaKnown RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 MSI1O43347 362 aaKnown RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 COCHO43405 550 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 MOCS2O96007 188 aaPredicted RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 CKMP06732 381 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 RHOP08100 348 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 HMBSP08397 361 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms