RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 FAM217AQ8IXS0 508 aa15.99■□□□□ 0.15
SHMT2-204ENST00000553324 PHTF2Q8N3S3 785 aa15.99■□□□□ 0.15
SHMT2-204ENST00000553324 TERB1Q8NA31 727 aa15.99■□□□□ 0.15
SHMT2-204ENST00000553324 NEK11Q8NG66 645 aa15.99■□□□□ 0.15
SHMT2-204ENST00000553324 IPO4Q8TEX9 1081 aaKnown RBP15.99■□□□□ 0.15
SHMT2-204ENST00000553324 SPAG5Q96R06 1193 aa15.99■□□□□ 0.15
SHMT2-204ENST00000553324 ERGIC2Q96RQ1 377 aa15.99■□□□□ 0.15
SHMT2-204ENST00000553324 EPC1Q9H2F5 836 aa15.99■□□□□ 0.15
SHMT2-204ENST00000553324 FAM207AQ9NSI2 230 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-204ENST00000553324 TMEM51Q9NW97 253 aa15.99■□□□□ 0.15
SHMT2-204ENST00000553324 FBXO10Q9UK96 956 aa15.99■□□□□ 0.15
SHMT2-204ENST00000553324 TLR6Q9Y2C9 796 aa15.99■□□□□ 0.15
SHMT2-204ENST00000553324 IRAK2O43187 625 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 LSM8O95777 96 aaKnown RBP15.98■□□□□ 0.15
SHMT2-204ENST00000553324 FYNP06241 537 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 STAT1P42224 750 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 DGKEP52429 567 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 SEC13P55735 322 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 MTA1Q13330 715 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 DMC1Q14565 340 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 SYCP1Q15431 976 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 FYB2Q5VWT5 728 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 PKN3Q6P5Z2 889 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 TOGARAM2Q6ZUX3 1019 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 PASD1Q8IV76 773 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 MSANTD4Q8NCY6 345 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 C1orf131Q8NDD1 294 aaKnown RBP15.98■□□□□ 0.15
SHMT2-204ENST00000553324 DDI1Q8WTU0 396 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 TMA16Q96EY4 203 aaKnown RBP15.98■□□□□ 0.15
SHMT2-204ENST00000553324 CPXM1Q96SM3 734 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 SLC2A11Q9BYW1 496 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 GANQ9H2C0 597 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 EBF1Q9UH73 591 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 SLC12A6Q9UHW9 1150 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 RAB23Q9ULC3 237 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 MMP17Q9ULZ9 603 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 NAALADL1Q9UQQ1 740 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 SIK3Q9Y2K2 1263 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 SLC27A6Q9Y2P4 619 aa15.98■□□□□ 0.15
SHMT2-204ENST00000553324 HSF2BPO75031 334 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 ALDH1A2O94788 518 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 APBB3O95704 486 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 IGLV3-27P01718 113 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 CISD3P0C7P0 127 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 PNMA6AP0CW24 399 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-204ENST00000553324 GBP1P32455 592 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 CDH5P33151 784 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-204ENST00000553324 TIE1P35590 1138 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 SOX5P35711 763 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 KIR2DL1P43626 348 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-204ENST00000553324 FNTBP49356 437 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 TPM4P67936 248 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 CDK17Q00537 523 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 KDSRQ06136 332 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 C10orf76Q5T2E6 689 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 MPP7Q5T2T1 576 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 HEATR6Q6AI08 1181 aaKnown RBP15.97■□□□□ 0.15
SHMT2-204ENST00000553324 SDE2Q6IQ49 451 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 DHX40Q8IX18 779 aaKnown RBP15.97■□□□□ 0.15
SHMT2-204ENST00000553324 ZNF557Q8N988 423 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-204ENST00000553324 DQX1Q8TE96 717 aaKnown RBP15.97■□□□□ 0.15
SHMT2-204ENST00000553324 HSD3B7Q9H2F3 369 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 C2orf42Q9NWW7 574 aa15.97■□□□□ 0.15
SHMT2-204ENST00000553324 NPC1O15118 1278 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 MSI1O43347 362 aaKnown RBP15.96■□□□□ 0.15
SHMT2-204ENST00000553324 TIMM44O43615 452 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 CCDC172P0C7W6 258 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 SLC2A3P11169 496 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 KLK7P49862 253 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 JAM2P57087 298 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 SLC6A3Q01959 620 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 CRY1Q16526 586 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 DCAF6Q58WW2 860 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 SYPL2Q5VXT5 272 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 OR6B2Q6IFH4 312 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 APTXQ7Z2E3 356 aaKnown RBP15.96■□□□□ 0.15
SHMT2-204ENST00000553324 ERICH1Q86X53 443 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 ZNF513Q8N8E2 541 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-204ENST00000553324 IL17RCQ8NAC3 791 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 SUMF1Q8NBK3 374 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 TXNDC5Q8NBS9 432 aaKnown RBP15.96■□□□□ 0.15
SHMT2-204ENST00000553324 TSTD1Q8NFU3 115 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 EPS8L1Q8TE68 723 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 DDX1Q92499 740 aaKnown RBP15.96■□□□□ 0.15
SHMT2-204ENST00000553324 RUBCNQ92622 972 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 BHMTQ93088 406 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 C18orf8Q96DM3 657 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 FUCA2Q9BTY2 467 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 POLMQ9NP87 494 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-204ENST00000553324 NLRC4Q9NPP4 1024 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.96■□□□□ 0.15
SHMT2-204ENST00000553324 RRN3Q9NYV6 651 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 PLK2Q9NYY3 685 aa15.96■□□□□ 0.15
SHMT2-204ENST00000553324 ZFHX2Q9C0A1 2572 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-204ENST00000553324 MYO16Q9Y6X6 1858 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 SYCE3A1L190 88 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 TYW5A2RUC4 315 aaKnown RBP15.95■□□□□ 0.14
SHMT2-204ENST00000553324 AXIN1O15169 862 aa15.95■□□□□ 0.14
SHMT2-204ENST00000553324 ZBTB24O43167 697 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-204ENST00000553324 HRO43593 1189 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms